RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ZNF248Q8NDW4 579 aa13.05□□□□□ -0.32
SHMT2-203ENST00000449049 REXO5Q96IC2 774 aaKnown RBP13.05□□□□□ -0.32
SHMT2-203ENST00000449049 CLPTM1LQ96KA5 538 aa13.05□□□□□ -0.32
SHMT2-203ENST00000449049 IP6K3Q96PC2 410 aa13.05□□□□□ -0.32
SHMT2-203ENST00000449049 OR7D2Q96RA2 312 aa13.05□□□□□ -0.32
SHMT2-203ENST00000449049 STACQ99469 402 aa13.05□□□□□ -0.32
SHMT2-203ENST00000449049 YIPF4Q9BSR8 244 aa13.05□□□□□ -0.32
SHMT2-203ENST00000449049 THUMPD1Q9NXG2 353 aaKnown RBP13.05□□□□□ -0.32
SHMT2-203ENST00000449049 P4HTMQ9NXG6 502 aa13.05□□□□□ -0.32
SHMT2-203ENST00000449049 GMPR2Q9P2T1 348 aaKnown RBP13.05□□□□□ -0.32
SHMT2-203ENST00000449049 NSG1A0A0A6YYJ2 146 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 ANXA11P50995 505 aaKnown RBP13.04□□□□□ -0.32
SHMT2-203ENST00000449049 DSTNP60981 165 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 SRSF6Q13247 344 aaKnown RBP13.04□□□□□ -0.32
SHMT2-203ENST00000449049 MYBPC3Q14896 1274 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 EBPQ15125 230 aaKnown RBP13.04□□□□□ -0.32
SHMT2-203ENST00000449049 ADRM1Q16186 407 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 PTOV1Q86YD1 416 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 ULK2Q8IYT8 1036 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 FBXW8Q8N3Y1 598 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 RNF148Q8N7C7 305 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 SLC16A11Q8NCK7 471 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 OR5D16Q8NGK9 328 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 OR8K3Q8NH51 312 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 M1APQ8TC57 530 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 ELP5Q8TE02 316 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 KCNE4Q8WWG9 221 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 UTP4Q969X6 686 aaKnown RBP13.04□□□□□ -0.32
SHMT2-203ENST00000449049 ITPAQ9BY32 194 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 PIGUQ9H490 435 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 TMEM38AQ9H6F2 299 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 MMP25Q9NPA2 562 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 FBXL4Q9UKA2 621 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 TTC36A6NLP5 189 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 DUXAA6NLW8 204 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 PDE5AO76074 875 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 SOX30O94993 753 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 NKX2-2O95096 273 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 ALOX5P09917 674 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 NUDT7P0C024 238 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 KCNJ2P63252 427 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 PSG6Q00889 435 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 FXNQ16595 210 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 DUSP5Q16690 384 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 CYP51A1Q16850 503 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 GCNT6Q5T4J0 391 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 WDR53Q7Z5U6 358 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-203ENST00000449049 ZZZ3Q8IYH5 903 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 AMER2Q8N7J2 671 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 OR2T12Q8NG77 320 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 FBXO30Q8TB52 745 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 ADAMTS15Q8TE58 950 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 JADE3Q92613 823 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 ADIPOR1Q96A54 375 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 BTBD9Q96Q07 612 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 KCTD14Q9BQ13 255 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-203ENST00000449049 DPH1Q9BZG8 443 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 DUSP22Q9NRW4 184 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 USP22Q9UPT9 525 aa13.04□□□□□ -0.32
SHMT2-203ENST00000449049 NUP214P35658 2090 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-203ENST00000449049 OR12D1P0DN82 309 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 ME2P23368 584 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 HTR1EP28566 365 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 CLCN2P51788 898 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 ATP1A4Q13733 1029 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 ZNHIT3Q15649 155 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-203ENST00000449049 SNCBQ16143 134 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 BTBD16Q32M84 506 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 CRTC2Q53ET0 693 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-203ENST00000449049 HSDL2Q6YN16 418 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 SLC29A4Q7RTT9 530 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 IFNEQ86WN2 208 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 HPS6Q86YV9 775 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 ZSCAN1Q8NBB4 408 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 FAM156AQ8NDB6 213 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 SLC9A6Q92581 669 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 GATA6Q92908 595 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 RAB8BQ92930 207 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 OTUB1Q96FW1 271 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-203ENST00000449049 SLC35A4Q96G79 324 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 WWTR1Q9GZV5 400 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 PIF1Q9H611 641 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 ZNF160Q9HCG1 818 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 A4GALTQ9NPC4 353 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 SUCOQ9UBS9 1254 aaKnown RBP13.03□□□□□ -0.32
SHMT2-203ENST00000449049 GPR55Q9Y2T6 319 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-203ENST00000449049 TRBV11-1A0A0K0K1C0 115 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 PEX12O00623 359 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 SORBS2O94875 1100 aaKnown RBP13.03□□□□□ -0.32
SHMT2-203ENST00000449049 AGR2O95994 175 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 CT45A8P0DMV1 189 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 CT45A9P0DMV2 189 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 ARAFP10398 606 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 WT1P19544 449 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-203ENST00000449049 PPICP45877 212 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 RNF4P78317 190 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 RBBP4Q09028 425 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 VMACQ2NL98 169 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 CT45A2Q5DJT8 189 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 HEPHL1Q6MZM0 1159 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms