RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 OR8D4Q8NGM9 314 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 OR5K2Q8NHB8 316 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 UCN3Q969E3 161 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 CAMK1GQ96NX5 476 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 KCNJ15Q99712 375 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 ATF6BQ99941 703 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 BEX2Q9BXY8 128 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 NIPAL2Q9H841 368 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 RPRD1BQ9NQG5 326 aaKnown RBP17.96■□□□□ 0.47
SDCBP-204ENST00000447182 PCYT1BQ9Y5K3 369 aaPredicted RBP17.96■□□□□ 0.47
SDCBP-204ENST00000447182 WNT6Q9Y6F9 365 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 A0A0G2JPF8 293 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 OR6C70A6NIJ9 312 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 HNRNPCL2B2RXH8 293 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 HNRNPCL3B7ZW38 293 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 FGF18O76093 207 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 GNRH1P01148 92 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 HNRNPCL4P0DMR1 293 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 PRKAR1AP10644 381 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 CFL1P23528 166 aaKnown RBP17.95■□□□□ 0.46
SDCBP-204ENST00000447182 WEE1P30291 646 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 SLC1A3P43003 542 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 CAV3P56539 151 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 DEFB103AP81534 67 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 TLE2Q04725 743 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 CAMK2BQ13554 666 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 ARHGAP15Q53QZ3 475 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 TYW3Q6IPR3 259 aaKnown RBP17.95■□□□□ 0.46
SDCBP-204ENST00000447182 SZRD1Q7Z422 152 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 UBE2J2Q8N2K1 259 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 YIPF7Q8N8F6 280 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 NLGN4YQ8NFZ3 816 aaPredicted RBP17.95■□□□□ 0.46
SDCBP-204ENST00000447182 JPH3Q8WXH2 748 aaPredicted RBP17.95■□□□□ 0.46
SDCBP-204ENST00000447182 CHFRQ96EP1 664 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 MENTQ9BUN1 341 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 SLC35C2Q9NQQ7 365 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 GIMAP4Q9NUV9 329 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 WDR70Q9NW82 654 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 GPR52Q9Y2T5 361 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 LTBP2Q14767 1821 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 H7BY64 318 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 SYT5O00445 386 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 HPGDSO60760 199 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 HLA-DPB1P04440 258 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 RPN2P04844 631 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 CISD3P0C7P0 127 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 BUD31P41223 144 aaPredicted RBP17.95■□□□□ 0.46
SDCBP-204ENST00000447182 GZMKP49863 264 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 CLDN20P56880 219 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 ST8SIA6P61647 398 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 TNK1Q13470 666 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 TMEM44Q2T9K0 475 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 OR4C11Q6IEV9 310 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 AMZ2Q86W34 360 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 PLCZ1Q86YW0 608 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 GJD3Q8N144 294 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 TP53I13Q8NBR0 393 aaPredicted RBP17.95■□□□□ 0.46
SDCBP-204ENST00000447182 SFXN5Q8TD22 340 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 RFKQ969G6 155 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 ARRDC3Q96B67 414 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 PRAP1Q96NZ9 151 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 TMEM43Q9BTV4 400 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 DPH7Q9BTV6 452 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 POLHQ9Y253 713 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 ALG5Q9Y673 324 aa17.95■□□□□ 0.46
SDCBP-204ENST00000447182 TCF20Q9UGU0 1960 aaKnown RBP17.95■□□□□ 0.46
SDCBP-204ENST00000447182 A0A1W2PPV9 198 aa17.94■□□□□ 0.46
SDCBP-204ENST00000447182 LYRM1O43325 122 aa17.94■□□□□ 0.46
SDCBP-204ENST00000447182 LZTS3O60299 673 aaPredicted RBP17.94■□□□□ 0.46
SDCBP-204ENST00000447182 LALBAP00709 142 aa17.94■□□□□ 0.46
SDCBP-204ENST00000447182 PSKH1P11801 424 aa17.94■□□□□ 0.46
SDCBP-204ENST00000447182 CD79BP40259 229 aa17.94■□□□□ 0.46
SDCBP-204ENST00000447182 DSG2Q14126 1118 aa17.94■□□□□ 0.46
SDCBP-204ENST00000447182 P2RY14Q15391 338 aa17.94■□□□□ 0.46
SDCBP-204ENST00000447182 NDUFAF5Q5TEU4 345 aa17.94■□□□□ 0.46
SDCBP-204ENST00000447182 FAM46CQ5VWP2 391 aa17.94■□□□□ 0.46
SDCBP-204ENST00000447182 OLIG3Q7RTU3 272 aa17.94■□□□□ 0.46
SDCBP-204ENST00000447182 AMER3Q8N944 861 aa17.94■□□□□ 0.46
SDCBP-204ENST00000447182 TMIEQ8NEW7 156 aa17.94■□□□□ 0.46
SDCBP-204ENST00000447182 NRTNQ99748 197 aa17.94■□□□□ 0.46
SDCBP-204ENST00000447182 MARVELD1Q9BSK0 173 aa17.94■□□□□ 0.46
SDCBP-204ENST00000447182 B3GAT2Q9NPZ5 323 aa17.94■□□□□ 0.46
SDCBP-204ENST00000447182 CLCA2Q9UQC9 943 aa17.94■□□□□ 0.46
SDCBP-204ENST00000447182 ABHD14A-ACY1A0A1B0GW23 586 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 FAM170BA6NMN3 283 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 SGK494L7N484 410 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 TNFRSF10AO00220 468 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 AKAP8O43823 692 aaKnown RBP17.93■□□□□ 0.46
SDCBP-204ENST00000447182 CXCL14O95715 111 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 C1QBP02746 253 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 NCBP2P52298 156 aaKnown RBP eCLIP17.93■□□□□ 0.46
SDCBP-204ENST00000447182 TAS2R38P59533 333 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 ZNF155Q12901 538 aaPredicted RBP17.93■□□□□ 0.46
SDCBP-204ENST00000447182 MZT2AQ6P582 158 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 BHLHB9Q6PI77 547 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 PAMR1Q6UXH9 720 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 PRICKLE2Q7Z3G6 844 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 TMEM145Q8NBT3 493 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 WFIKKN2Q8TEU8 576 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 ZNF649Q9BS31 505 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms