RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 NDST2P52849 883 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 DVL1P1P54792 670 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 MFAP3P55082 362 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 EIF3EP60228 445 aaKnown RBP4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 S100A12P80511 92 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 RBP5P82980 135 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 OTUD4Q01804 1114 aaKnown RBP4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 POU3F1Q03052 451 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 GNA12Q03113 381 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 MBTD1Q05BQ5 628 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 BFSP1Q12934 665 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 SLC39A6Q13433 755 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 SCN5AQ14524 2016 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 SMU1Q2TAY7 513 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 AHDC1Q5TGY3 1603 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 GPR107Q5VW38 600 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 ANKRD26P1Q6NSI1 321 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 UGT3A1Q6NUS8 523 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 MFSD12Q6NUT3 480 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 ZNF773Q6PK81 442 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 SUSD1Q6UWL2 747 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 C15orf52Q6ZUT6 534 aaKnown RBP4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 FOXL2NBQ6ZUU3 175 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 TOM1L2Q6ZVM7 507 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 ZNF767PQ75MW2 155 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 TLK2Q86UE8 772 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 CATSPER3Q86XQ3 398 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 ZNF677Q86XU0 584 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 CLYBLQ8N0X4 340 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 SFRP1Q8N474 314 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 DCLK2Q8N568 766 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 LRRC20Q8TCA0 184 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 BLOC1S5Q8TDH9 187 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 HCAR2Q8TDS4 363 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 SSMEM1Q8WWF3 244 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 SEPT1Q8WYJ6 367 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 EXT2Q93063 718 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 PPWD1Q96BP3 646 aaKnown RBP4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 MOB3AQ96BX8 217 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 LRRC39Q96DD0 335 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 SCRN2Q96FV2 425 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 CNDP1Q96KN2 507 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 TSNARE1Q96NA8 513 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 MUS81Q96NY9 551 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 PKP4Q99569 1192 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 FEVQ99581 238 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 MGME1Q9BQP7 344 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 SYT11Q9BT88 431 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 CHID1Q9BWS9 393 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 TEX13BQ9BXU2 312 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 SLC7A5P2Q9GIP4 190 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 VN1R1Q9GZP7 353 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 ING2Q9H160 280 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 KCNK13Q9HB14 408 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 SIX2Q9NPC8 291 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 COMMD8Q9NX08 183 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 MARCOQ9UEW3 520 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 WARS2Q9UGM6 360 aaKnown RBP4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 MOSPD1Q9UJG1 213 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 VANGL2Q9ULK5 521 aa4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 NOSIPQ9Y314 301 aaKnown RBP4.08□□□□□ -1.76
HMGB1P16-201ENST00000447155 DICER1Q9UPY3 1922 aaKnown RBP4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 SHANK3Q9BYB0 1731 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 ROBO1Q9Y6N7 1651 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 ASTN1O14525 1302 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 GAKO14976 1311 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 PNMA8CA0A1B0GUJ8 204 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 A0A1W2PRB8 838 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 HEATR9A2RTY3 570 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 ANXA2P2A6NMY6 339 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 CENPXA8MT69 81 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 PDZK1P1A8MUH7 402 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 TRIM49D1C9J1S8 452 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 E7ESA3 106 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 M0R3G1 203 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 BET1O15155 118 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 POLR1CO15160 346 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 RAD51BO15315 384 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 ZW10O43264 779 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 NOS1APO75052 506 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 CCNKO75909 580 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 BBOX1O75936 387 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 SRP72O76094 671 aaKnown RBP4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 VAPBO95292 243 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 IGHV2-70P01814 119 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 BPGMP07738 259 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 PLA2G4BP0C869 781 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 TRIM49P0CI25 452 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 TRIM49CP0CI26 452 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 NCF2P19878 526 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 MPZP25189 248 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 IVDP26440 423 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 GCAP28676 217 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 TRIM23P36406 574 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 NR2C2P49116 596 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 HLCSP50747 726 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 CX3CL1P78423 397 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 ILF3Q12906 894 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 TFDP1Q14186 410 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 POU6F1Q14863 301 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms