RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 CBX2Q14781 532 aaPredicted RBP7.5□□□□□ -1.21
SMG1-202ENST00000446231 ELOA3BQ3SY89 546 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 ELOA3Q8NG57 546 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 SLC35G5Q96KT7 338 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 ACBD6Q9BR61 282 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 PCBD2Q9H0N5 130 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 ZNF385DQ9H6B1 395 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 MUTYHQ9UIF7 546 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 BTNL2Q9UIR0 455 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 TDRD6O60522 2096 aaKnown RBP7.5□□□□□ -1.21
SMG1-202ENST00000446231 FXYD1O00168 92 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 OR12D1P0DN82 309 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 GLCCI1Q86VQ1 547 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 RDH10Q8IZV5 341 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 BBS10Q8TAM1 723 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 LTB4R2Q9NPC1 389 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 PITX1P78337 314 aaPredicted RBP7.49□□□□□ -1.21
SMG1-202ENST00000446231 MRPS6P82932 125 aaKnown RBP7.49□□□□□ -1.21
SMG1-202ENST00000446231 KIAA1958Q8N8K9 716 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 PAQR8Q8TEZ7 354 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 UBXN10Q96LJ8 280 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 TRAF4Q9BUZ4 470 aaPredicted RBP7.49□□□□□ -1.21
SMG1-202ENST00000446231 NLE1Q9NVX2 485 aaPredicted RBP7.49□□□□□ -1.21
SMG1-202ENST00000446231 TSPAN15O95858 294 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 GPR50Q13585 617 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 ZNF546Q86UE3 836 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 C2orf73Q8N5S3 287 aaPredicted RBP7.49□□□□□ -1.21
SMG1-202ENST00000446231 CXorf40BQ96DE9 158 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 HAPLN2Q9GZV7 340 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 SFTPBP07988 381 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 HSD3B1P14060 373 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 HSD3B2P26439 372 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 GPR1P46091 355 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 FAM46CQ5VWP2 391 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 OR52E4Q8NGH9 312 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 SETD7Q8WTS6 366 aaKnown RBP7.49□□□□□ -1.21
SMG1-202ENST00000446231 SCAMP2O15127 329 aaKnown RBP7.49□□□□□ -1.21
SMG1-202ENST00000446231 TCRBP04435 133 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 INHBBP09529 407 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 SEC61A1P61619 476 aaKnown RBP7.49□□□□□ -1.21
SMG1-202ENST00000446231 CTBSQ01459 385 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 CRTC1Q6UUV9 634 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 IL20RBQ6UXL0 311 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 SSX9Q7RTT3 188 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 CLDN19Q8N6F1 224 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 OR4K5Q8NGD3 323 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 LILRB1Q8NHL6 650 aaPredicted RBP7.49□□□□□ -1.21
SMG1-202ENST00000446231 PCDHGA2Q9Y5H1 932 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 ZNF821O75541 412 aaPredicted RBP7.49□□□□□ -1.21
SMG1-202ENST00000446231 ALDH3B1P43353 468 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 KIR2DL3P43628 341 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.49□□□□□ -1.21
SMG1-202ENST00000446231 TRMT10AQ8TBZ6 339 aaKnown RBP7.49□□□□□ -1.21
SMG1-202ENST00000446231 PDLIM7Q9NR12 457 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 TO15178 435 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 GIPRP48546 466 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 NFATC2Q13469 925 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 HTR4Q13639 388 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 PODNL1Q6PEZ8 512 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 ALOXE3Q9BYJ1 711 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 PLCXD1Q9NUJ7 323 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 TAS2R8Q9NYW2 309 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 ANKRD66B4E2M5 251 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 EEF1E1-BLOC1S5C9J1V9 151 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 ADAM10O14672 748 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 UCHL1P09936 223 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 RPS24P62847 133 aaKnown RBP7.49□□□□□ -1.21
SMG1-202ENST00000446231 SLC35A2P78381 396 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 MLLT1Q03111 559 aaPredicted RBP7.49□□□□□ -1.21
SMG1-202ENST00000446231 RAB40BQ12829 278 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 NT5C3BQ969T7 300 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 HRH4Q9H3N8 390 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 CBY1Q9Y3M2 126 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 TUBG1P23258 451 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 ZNF529Q6P280 563 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 COMTD1Q86VU5 262 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 TP53I13Q8NBR0 393 aaPredicted RBP7.49□□□□□ -1.21
SMG1-202ENST00000446231 OR5D16Q8NGK9 328 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 OR2AG1Q9H205 316 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 NMUR1Q9HB89 426 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 MYNNQ9NPC7 610 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 ZNF763Q0D2J5 394 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 FOXRED2Q8IWF2 684 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 ZNF527Q8NB42 609 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 CAMK2AQ9UQM7 478 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 POP4O95707 220 aaKnown RBP7.49□□□□□ -1.21
SMG1-202ENST00000446231 HOXA1P49639 335 aaPredicted RBP7.49□□□□□ -1.21
SMG1-202ENST00000446231 TNK1Q13470 666 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 PTCHD3Q3KNS1 767 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 CDNFQ49AH0 187 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 MS4A13Q5J8X5 152 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 PLBD1Q6P4A8 553 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 OR4M1Q8NGD0 313 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 FATE1Q969F0 183 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 ADAM2Q99965 735 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 PCNX1Q96RV3 2341 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 TRBV2A0A0J9YWF9 115 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 UGT2B7P16662 529 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 UBE2NLQ5JXB2 153 aa7.49□□□□□ -1.21
SMG1-202ENST00000446231 DOCK8Q8NF50 2099 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms