RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 TMEM41AQ96HV5 264 aa18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 APOPT1Q96IL0 206 aa18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 ANKZF1Q9H8Y5 726 aa18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 ANKRA2Q9H9E1 313 aa18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 OR10H1Q9Y4A9 318 aa18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 FAM215AQ9Y5M1 114 aa18.18■□□□□ 0.5
SHROOM1-204ENST00000440118 SERTM1A2A2V5 107 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 PRAMEF25A6NGN4 478 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 COQ9O75208 318 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 ERN1O75460 977 aaKnown RBP18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 GLI4P10075 376 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 DRD5P21918 477 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 SSTR2P30874 369 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 ZFP36L2P47974 494 aaKnown RBP18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 EMDP50402 254 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 CLEC6AQ6EIG7 209 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 SLC30A6Q6NXT4 461 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 C10orf107Q8IVU9 208 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 TMBIM1Q969X1 311 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 TMCO6Q96DC7 493 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 COL21A1Q96P44 957 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 GNRHR2Q96P88 292 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 SPOCK3Q9BQ16 436 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 TRIM8Q9BZR9 551 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 UCK2Q9BZX2 261 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 MYNNQ9NPC7 610 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 TAS2R9Q9NYW1 312 aa18.17■□□□□ 0.5
SHROOM1-204ENST00000440118 SLC28A1O00337 649 aa18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 RGS14O43566 566 aa18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 UGT2B11O75310 529 aa18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 SEC22BO75396 215 aa18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 JUNP05412 331 aaKnown RBP18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 CDK9P50750 372 aaKnown RBP18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 VSNL1P62760 191 aa18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 PSPHP78330 225 aa18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 TIGD3Q6B0B8 471 aa18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 TRIM46Q7Z4K8 759 aa18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 FAM76AQ8TAV0 307 aa18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 DTNBP1Q96EV8 351 aa18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 BTBD9Q96Q07 612 aa18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 NODALQ96S42 347 aa18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 STMN4Q9H169 189 aaPredicted RBP18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 FOLH1BQ9HBA9 442 aa18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 SIRT5Q9NXA8 310 aa18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 MAPRE3Q9UPY8 281 aa18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 CAMK2AQ9UQM7 478 aa18.16■□□□□ 0.5
SHROOM1-204ENST00000440118 ADGRG4Q8IZF6 3080 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 AZIN1O14977 448 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 TRIM13O60858 407 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 ABCB7O75027 752 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 HPNP05981 417 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 CORO7P57737 925 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 SLC18A2Q05940 514 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 EFR3AQ14156 821 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 PCLAFQ15004 111 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 SF3B4Q15427 424 aaKnown RBP eCLIP18.15■□□□□ 0.54e-10■■■■□ 25.6
SHROOM1-204ENST00000440118 SH2D4BQ5SQS7 431 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 RTL6Q6ICC9 239 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 NOXRED1Q6NXP6 359 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 IKBIPQ70UQ0 350 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 WDR53Q7Z5U6 358 aaPredicted RBP18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 PM20D2Q8IYS1 436 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 ULK2Q8IYT8 1036 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 HGDQ93099 445 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 ADOQ96SZ5 270 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 TRMOQ9BU70 441 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 LRTM1Q9HBL6 345 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 GALNT9Q9HCQ5 603 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 DDX18Q9NVP1 670 aaKnown RBP18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 GPR55Q9Y2T6 319 aaPredicted RBP18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 WBP11Q9Y2W2 641 aaKnown RBP18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 SLC6A5Q9Y345 797 aa18.15■□□□□ 0.5
SHROOM1-204ENST00000440118 A0A0G2JNJ9 132 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 C2orf72A6NCS6 295 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 OR6C70A6NIJ9 312 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 SNPHO15079 494 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 TO15178 435 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 SLITRK5O94991 958 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 NUDT17P0C025 328 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 NEFHP12036 1026 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 MC3RP41968 323 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 MRPS22P82650 360 aaKnown RBP18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 SNTA1Q13424 505 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 WIPI1Q5MNZ9 446 aaPredicted RBP18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 DESI1Q6ICB0 168 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 TMEM107Q6UX40 140 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 LARP4Q71RC2 724 aaKnown RBP eCLIP18.14■□□□□ 0.492e-6■□□□□ 9.8
SHROOM1-204ENST00000440118 SLC44A2Q8IWA5 706 aaPredicted RBP18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 DDIASQ8IXT1 998 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 OR7G2Q8NG99 324 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 OR14L1PQ8NHC6 308 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 C11orf24Q96F05 449 aaPredicted RBP18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 FAM111AQ96PZ2 611 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 UBQLN3Q9H347 655 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 TNFRSF12AQ9NP84 129 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 SERHLQ9NQF3 203 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 C1orf109Q9NX04 203 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 Q9UFV3 132 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 PCDHGB3Q9Y5G1 929 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 PTGDR2Q9Y5Y4 395 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms