RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 SLC3A1Q07837 685 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 ZNF273Q14593 569 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 AKIRIN2Q53H80 203 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 MLIPQ5VWP3 458 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 LRFN4Q6PJG9 635 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 ZNF782Q6ZMW2 699 aaPredicted RBP11.07□□□□□ -0.64
SMPD4-209ENST00000439886 CLDN22Q8N7P3 220 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 OR11H4Q8NGC9 324 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 WDR48Q8TAF3 677 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 MARVELD3Q96A59 401 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 TMEM159Q96B96 161 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 SCRN2Q96FV2 425 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 ARL5BQ96KC2 179 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 GDF15Q99988 308 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 DPAGT1Q9H3H5 408 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 ZDHHC6Q9H6R6 413 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 ASH2LQ9UBL3 628 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 FTSJ1Q9UET6 329 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 BRCA2P51587 3418 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 A0A1B0GVM2 712 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 SIGLEC5O15389 551 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 MT-ND4P03905 459 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 DGKGP49619 791 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 LGALS3BPQ08380 585 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 SIGLEC14Q08ET2 396 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 CNTN1Q12860 1018 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 GRK1Q15835 563 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 PDSS1Q5T2R2 415 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 MEDAGQ5VYS4 303 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 GDF6Q6KF10 455 aaPredicted RBP11.06□□□□□ -0.64
SMPD4-209ENST00000439886 NCEH1Q6PIU2 408 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 AGTRAPQ6RW13 159 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 BOLLQ8N9W6 283 aaKnown RBP11.06□□□□□ -0.64
SMPD4-209ENST00000439886 OR8J2Q8NGG1 315 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 WDFY2Q96P53 400 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 HTATIP2Q9BUP3 242 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 PIGUQ9H490 435 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 METTL17Q9H7H0 456 aaPredicted RBP11.06□□□□□ -0.64
SMPD4-209ENST00000439886 MVB12BQ9H7P6 319 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 IMP3Q9NV31 184 aaKnown RBP11.06□□□□□ -0.64
SMPD4-209ENST00000439886 CNIH4Q9P003 139 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 MBD2Q9UBB5 411 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 DOCK1Q14185 1865 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 ARID1AO14497 2285 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 FAM183AA6NL82 134 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 CHP2O43745 196 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 ALDOBP05062 364 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 ATXN8OSP0DMR3 200 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 CTNNB1P35222 781 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 XCR1P46094 333 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 AGFG1P52594 562 aaKnown RBP11.06□□□□□ -0.64
SMPD4-209ENST00000439886 CDH11P55287 796 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 FLI1Q01543 452 aaPredicted RBP11.06□□□□□ -0.64
SMPD4-209ENST00000439886 KCNA10Q16322 511 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 ZXDCQ2QGD7 858 aaPredicted RBP11.06□□□□□ -0.64
SMPD4-209ENST00000439886 FAM27D1Q5T7N8 215 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 POMZP3Q6PJE2 187 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 PRSS55Q6UWB4 352 aaPredicted RBP11.06□□□□□ -0.64
SMPD4-209ENST00000439886 ALKAL2Q6UX46 152 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 OXR1Q8N573 874 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 LILRA3Q8N6C8 439 aaPredicted RBP11.06□□□□□ -0.64
SMPD4-209ENST00000439886 OR51G2Q8NGK0 314 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 OR4C15Q8NGM1 316 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 BBS10Q8TAM1 723 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 RBPMSQ93062 196 aaKnown RBP11.06□□□□□ -0.64
SMPD4-209ENST00000439886 YIPF5Q969M3 257 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 PAWRQ96IZ0 340 aaKnown RBP11.06□□□□□ -0.64
SMPD4-209ENST00000439886 TEFMQ96QE5 360 aaKnown RBP11.06□□□□□ -0.64
SMPD4-209ENST00000439886 PARK7Q99497 189 aaKnown RBP11.06□□□□□ -0.64
SMPD4-209ENST00000439886 SPNS1Q9H2V7 528 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 ASIC5Q9NY37 505 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 ACTR10Q9NZ32 417 aa11.06□□□□□ -0.64
SMPD4-209ENST00000439886 MYADML2A6NDP7 307 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 CFDP00746 253 aaPredicted RBP11.05□□□□□ -0.64
SMPD4-209ENST00000439886 SEMG1P04279 462 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 CD22P20273 847 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 MTNR1AP48039 350 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 KIAA1024LP59773 190 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 SMAD4Q13485 552 aaKnown RBP11.05□□□□□ -0.64
SMPD4-209ENST00000439886 PLK5Q496M5 336 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 TIGD3Q6B0B8 471 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 REEP3Q6NUK4 255 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 CRTC1Q6UUV9 634 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 C5orf46Q6UWT4 87 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 ESPNLQ6ZVH7 1005 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 TRPV1Q8NER1 839 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 OR7G3Q8NG95 312 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 OR52N2Q8NGI0 321 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 ZNF671Q8TAW3 534 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 FATE1Q969F0 183 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 TMEM19Q96HH6 336 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 ZNF768Q9H5H4 540 aaKnown RBP11.05□□□□□ -0.64
SMPD4-209ENST00000439886 REEP4Q9H6H4 257 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 NIT2Q9NQR4 276 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 A0A1W2PPL8 197 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 KLKB1P03952 638 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 HLA-DPB1P04440 258 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 CD63P08962 238 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 CR2P20023 1033 aa11.05□□□□□ -0.64
SMPD4-209ENST00000439886 LCN1P31025 176 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms