RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 KCT2Q8NC54 265 aa14.97□□□□□ -0.01
DHFR-201ENST00000439211 BTN2A2Q8WVV5 523 aa14.97□□□□□ -0.01
DHFR-201ENST00000439211 ACSL6Q9UKU0 697 aa14.97□□□□□ -0.01
DHFR-201ENST00000439211 DYRK1BQ9Y463 629 aa14.97□□□□□ -0.01
DHFR-201ENST00000439211 NYNRINQ9P2P1 1898 aaKnown RBP14.96□□□□□ -0.01
DHFR-201ENST00000439211 KPNA3O00505 521 aaPredicted RBP14.96□□□□□ -0.01
DHFR-201ENST00000439211 MPC2O95563 127 aa14.96□□□□□ -0.01
DHFR-201ENST00000439211 ATP1B2P14415 290 aaPredicted RBP14.96□□□□□ -0.01
DHFR-201ENST00000439211 CXCL3P19876 107 aa14.96□□□□□ -0.01
DHFR-201ENST00000439211 HOXA9P31269 272 aa14.96□□□□□ -0.01
DHFR-201ENST00000439211 CTSOP43234 321 aaPredicted RBP14.96□□□□□ -0.01
DHFR-201ENST00000439211 THOC6Q86W42 341 aaKnown RBP14.96□□□□□ -0.01
DHFR-201ENST00000439211 VRK3Q8IV63 474 aa14.96□□□□□ -0.01
DHFR-201ENST00000439211 GATAD2BQ8WXI9 593 aa14.96□□□□□ -0.01
DHFR-201ENST00000439211 KLHL1Q9NR64 748 aa14.96□□□□□ -0.01
DHFR-201ENST00000439211 KIF25Q9UIL4 384 aa14.96□□□□□ -0.01
DHFR-201ENST00000439211 SCP2D1Q9UJQ7 156 aa14.96□□□□□ -0.01
DHFR-201ENST00000439211 ANKDD1BA6NHY2 528 aa14.96□□□□□ -0.01
DHFR-201ENST00000439211 C1QCP02747 245 aa14.96□□□□□ -0.01
DHFR-201ENST00000439211 FAM26DQ5JW98 314 aa14.96□□□□□ -0.01
DHFR-201ENST00000439211 TMCO2Q7Z6W1 182 aaPredicted RBP14.96□□□□□ -0.01
DHFR-201ENST00000439211 ZER1Q7Z7L7 766 aa14.96□□□□□ -0.01
DHFR-201ENST00000439211 SYT14Q8NB59 555 aa14.96□□□□□ -0.01
DHFR-201ENST00000439211 OR52P1PQ8NH57 321 aa14.96□□□□□ -0.01
DHFR-201ENST00000439211 ARPC5O15511 151 aa14.96□□□□□ -0.02
DHFR-201ENST00000439211 RNGTTO60942 597 aaKnown RBP14.96□□□□□ -0.02
DHFR-201ENST00000439211 F11P03951 625 aa14.96□□□□□ -0.02
DHFR-201ENST00000439211 RORAP35398 523 aa14.96□□□□□ -0.02
DHFR-201ENST00000439211 BDKRB1P46663 353 aa14.96□□□□□ -0.02
DHFR-201ENST00000439211 DEFA6Q01524 100 aa14.96□□□□□ -0.02
DHFR-201ENST00000439211 MACC1Q6ZN28 852 aa14.96□□□□□ -0.02
DHFR-201ENST00000439211 NAGSQ8N159 534 aa14.96□□□□□ -0.02
DHFR-201ENST00000439211 NR4A3Q92570 626 aa14.96□□□□□ -0.02
DHFR-201ENST00000439211 PPCDCQ96CD2 204 aa14.96□□□□□ -0.02
DHFR-201ENST00000439211 TXNL4BQ9NX01 149 aaKnown RBP14.96□□□□□ -0.02
DHFR-201ENST00000439211 MEF2AQ02078 507 aaPredicted RBP14.95□□□□□ -0.02
DHFR-201ENST00000439211 DOC2AQ14183 400 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 GPR176Q14439 515 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 ATAT1Q5SQI0 421 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 ATRAIDQ6UW56 229 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 PAQR7Q86WK9 346 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 MARCH9Q86YJ5 346 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 OR1M1Q8NGA1 313 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 WDFY2Q96P53 400 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 CASD1Q96PB1 797 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 SLC38A2Q96QD8 506 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 SLC38A3Q99624 504 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 A0A1W2PRU2 124 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 AKAP8O43823 692 aaKnown RBP14.95□□□□□ -0.02
DHFR-201ENST00000439211 PCDH7O60245 1069 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 SDC3O75056 442 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 SPDEFO95238 335 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 HTR3BO95264 441 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 IL1AP01583 271 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 ZDHHC11BP0C7U3 371 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 ETFAP13804 333 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 AMD1P17707 334 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 GIFP27352 417 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 SSX1Q16384 188 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 TCTE1Q5JU00 501 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 IER5LQ5T953 404 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 ANXA8L1Q5VT79 327 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 AGTRAPQ6RW13 159 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 KIAA0907Q7Z7F0 614 aaPredicted RBP14.95□□□□□ -0.02
DHFR-201ENST00000439211 SLC25A46Q96AG3 418 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 TMEM43Q9BTV4 400 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 SPHK1Q9NYA1 384 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 PCOLCE2Q9UKZ9 415 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 SYNDIG1LA6NDD5 238 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 E7EQ34 232 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 TFP02787 698 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 H2AFB2P0C5Z0 115 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 PPIGQ13427 754 aaKnown RBP eCLIP14.95□□□□□ -0.02
DHFR-201ENST00000439211 MPPE1Q53F39 396 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 C5orf46Q6UWT4 87 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 BTN2A1Q7KYR7 527 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 ZNF614Q8N883 585 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 NFKBIDQ8NI38 313 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 NSMAFQ92636 917 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 UCN3Q969E3 161 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 PKP4Q99569 1192 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 SIRT5Q9NXA8 310 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 MRTO4Q9UKD2 239 aaKnown RBP14.95□□□□□ -0.02
DHFR-201ENST00000439211 EXO1Q9UQ84 846 aaKnown RBP14.95□□□□□ -0.02
DHFR-201ENST00000439211 CSNK1G3Q9Y6M4 447 aa14.95□□□□□ -0.02
DHFR-201ENST00000439211 ZNF236Q9UL36 1845 aa14.94□□□□□ -0.02
DHFR-201ENST00000439211 SOX14O95416 240 aa14.94□□□□□ -0.02
DHFR-201ENST00000439211 SCG5P05408 212 aa14.94□□□□□ -0.02
DHFR-201ENST00000439211 LPLP06858 475 aa14.94□□□□□ -0.02
DHFR-201ENST00000439211 FEN1P39748 380 aaKnown RBP14.94□□□□□ -0.02
DHFR-201ENST00000439211 RPS13P62277 151 aaKnown RBP14.94□□□□□ -0.02
DHFR-201ENST00000439211 MRPL58Q14197 206 aaKnown RBP14.94□□□□□ -0.02
DHFR-201ENST00000439211 IFI44LQ53G44 452 aa14.94□□□□□ -0.02
DHFR-201ENST00000439211 TMIGD1Q6UXZ0 262 aa14.94□□□□□ -0.02
DHFR-201ENST00000439211 SSX9Q7RTT3 188 aa14.94□□□□□ -0.02
DHFR-201ENST00000439211 NPAS3Q8IXF0 933 aa14.94□□□□□ -0.02
DHFR-201ENST00000439211 DUSP18Q8NEJ0 188 aa14.94□□□□□ -0.02
DHFR-201ENST00000439211 RPLP0P6Q8NHW5 317 aa14.94□□□□□ -0.02
DHFR-201ENST00000439211 ING5Q8WYH8 240 aa14.94□□□□□ -0.02
DHFR-201ENST00000439211 CMSS1Q9BQ75 279 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms