RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 MRPL21Q7Z2W9 205 aaKnown RBP11.45□□□□□ -0.58
NEK1-201ENST00000439128 OR5K2Q8NHB8 316 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 OR14A16Q8NHC5 309 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 CD200R1Q8TD46 325 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 CUEDC1Q9NWM3 386 aaPredicted RBP11.45□□□□□ -0.58
NEK1-201ENST00000439128 COMMD3Q9UBI1 195 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 TOGARAM1Q9Y4F4 1720 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 FOXE1O00358 373 aaPredicted RBP11.45□□□□□ -0.58
NEK1-201ENST00000439128 GPR39O43194 453 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 MBTPS2O43462 519 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 RAD51DO75771 328 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 KCNK5O95279 499 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 THBS2P35442 1172 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 COL13A1Q5TAT6 717 aaPredicted RBP11.45□□□□□ -0.58
NEK1-201ENST00000439128 C3orf33Q6P1S2 294 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 ETFBKMTQ8IXQ9 262 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 GALNT15Q8N3T1 639 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 OR51G2Q8NGK0 314 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 APIPQ96GX9 242 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 WBP11Q9Y2W2 641 aaKnown RBP11.45□□□□□ -0.58
NEK1-201ENST00000439128 MKRN2OSH3BPM6 223 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 CCRL2O00421 344 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 FOXN2P32314 431 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 NUDT6P53370 316 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 CDH15P55291 814 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 PITPNAQ00169 270 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 PAQR9Q6ZVX9 377 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 SSX6Q7RTT6 188 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 TMEM135Q86UB9 458 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 OR2T33Q8NG76 320 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 CIDECQ96AQ7 238 aaPredicted RBP11.45□□□□□ -0.58
NEK1-201ENST00000439128 PPP1R14BQ96C90 147 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 DPH2Q9BQC3 489 aaPredicted RBP11.45□□□□□ -0.58
NEK1-201ENST00000439128 SLC5A7Q9GZV3 580 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 CLEC4EQ9ULY5 219 aa11.45□□□□□ -0.58
NEK1-201ENST00000439128 EI24O14681 340 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 PROM1O43490 865 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 DHFRP00374 187 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 CCR7P32248 378 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 MPLP40238 635 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 SLC5A9Q2M3M2 681 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 LEG1Q6P5S2 330 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 Q6ZS52 159 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 LAS2Q8IYD9 372 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 FITM2Q8N6M3 262 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 GATAD2BQ8WXI9 593 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 RHBDF1Q96CC6 855 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 TLCD1Q96CP7 247 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 COQ10BQ9H8M1 238 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 TRNAU1APQ9NX07 287 aaKnown RBP11.44□□□□□ -0.58
NEK1-201ENST00000439128 AQP12BA6NM10 295 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 MPPED1O15442 326 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 SCGB1D2O95969 90 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 MAPK3P27361 379 aaPredicted RBP11.44□□□□□ -0.58
NEK1-201ENST00000439128 PTGER1P34995 402 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 ACVR1BP36896 505 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 GPR4P46093 362 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 GSCP56915 257 aaPredicted RBP11.44□□□□□ -0.58
NEK1-201ENST00000439128 RAB15P59190 212 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 MFSD13AQ14CX5 517 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 ADAMTSL4Q6UY14 1074 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 B3GNT6Q6ZMB0 384 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 AQP12AQ8IXF9 295 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 CLECL1Q8IZS7 167 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 ZNF619Q8N2I2 560 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 KDM1BQ8NB78 822 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 ZNF548Q8NEK5 533 aaPredicted RBP11.44□□□□□ -0.58
NEK1-201ENST00000439128 BCL7CQ8WUZ0 217 aaPredicted RBP11.44□□□□□ -0.58
NEK1-201ENST00000439128 NEDD4LQ96PU5 975 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 LOC100509620A0A075B734 347 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 TRGV8A0A0C4DH27 118 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 PRRG2O14669 202 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 MRPL33O75394 65 aaKnown RBP11.44□□□□□ -0.58
NEK1-201ENST00000439128 RFPL3O75679 317 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 DDAH2O95865 285 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 KLKB1P03952 638 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 CTXN1P60606 82 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 XIAPP98170 497 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 DAG1Q14118 895 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 MBTPS1Q14703 1052 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 ZNF572Q7Z3I7 529 aaPredicted RBP11.44□□□□□ -0.58
NEK1-201ENST00000439128 ARHGAP12Q8IWW6 846 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 TCEANCQ8N8B7 351 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 LMNTD1Q8N9Z9 388 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 OR7G3Q8NG95 312 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 OR13C3Q8NGS6 347 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 HOXB13Q92826 284 aaPredicted RBP11.44□□□□□ -0.58
NEK1-201ENST00000439128 C1GALT1Q9NS00 363 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 RSL24D1Q9UHA3 163 aaKnown RBP11.44□□□□□ -0.58
NEK1-201ENST00000439128 TBC1D24Q9ULP9 559 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 DHDHQ9UQ10 334 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 FAM240BA0A1B0GVZ2 78 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 FAM172BPA6NC97 362 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 ANKRD28O15084 1053 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 ZNF252P-AS1Q0IIN9 211 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 GINS1Q14691 196 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 RPL13AP3Q6NVV1 102 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 OR52N2Q8NGI0 321 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 PROKR1Q8TCW9 393 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 SEC14L1Q92503 715 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms