RNA–Protein interactions for RNA: ENST00000437679.3

LIMS3-201, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LIMS3, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-201ENST00000437679 OR7G2Q8NG99 324 aa13.95□□□□□ -0.18
LIMS3-201ENST00000437679 FAM57AQ8TBR7 257 aa13.95□□□□□ -0.18
LIMS3-201ENST00000437679 PPCDCQ96CD2 204 aa13.95□□□□□ -0.18
LIMS3-201ENST00000437679 ZNF764Q96H86 408 aaPredicted RBP13.95□□□□□ -0.18
LIMS3-201ENST00000437679 AMDHD1Q96NU7 426 aa13.95□□□□□ -0.18
LIMS3-201ENST00000437679 BTBD9Q96Q07 612 aa13.95□□□□□ -0.18
LIMS3-201ENST00000437679 GLIPR2Q9H4G4 154 aa13.95□□□□□ -0.18
LIMS3-201ENST00000437679 LDAHQ9H6V9 325 aa13.95□□□□□ -0.18
LIMS3-201ENST00000437679 EXO5Q9H790 373 aa13.95□□□□□ -0.18
LIMS3-201ENST00000437679 METTL7AQ9H8H3 244 aa13.95□□□□□ -0.18
LIMS3-201ENST00000437679 FOLH1BQ9HBA9 442 aa13.95□□□□□ -0.18
LIMS3-201ENST00000437679 SH3BP4Q9P0V3 963 aa13.95□□□□□ -0.18
LIMS3-201ENST00000437679 BAIAP2L1Q9UHR4 511 aa13.95□□□□□ -0.18
LIMS3-201ENST00000437679 MEMO1Q9Y316 297 aa13.95□□□□□ -0.18
LIMS3-201ENST00000437679 PLOD2O00469 737 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 PDPK1O15530 556 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 PEX11AO75192 247 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 ERN1O75460 977 aaKnown RBP13.94□□□□□ -0.18
LIMS3-201ENST00000437679 LYPLA1O75608 230 aaPredicted RBP13.94□□□□□ -0.18
LIMS3-201ENST00000437679 SNUPNO95149 360 aaKnown RBP13.94□□□□□ -0.18
LIMS3-201ENST00000437679 IGHG3P01860 377 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 DHRS4L1P0CG22 281 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 BCKDHAP12694 445 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 GRK2P25098 689 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 KRT20P35900 424 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 MC3RP41968 323 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 MASP1P48740 699 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 SMSP52788 366 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 ZNF155Q12901 538 aaPredicted RBP13.94□□□□□ -0.18
LIMS3-201ENST00000437679 BEND6Q5SZJ8 279 aaPredicted RBP13.94□□□□□ -0.18
LIMS3-201ENST00000437679 HHATQ5VTY9 493 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 TRILQ7L0X0 811 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 R3HCC1LQ7Z5L2 792 aaKnown RBP13.94□□□□□ -0.18
LIMS3-201ENST00000437679 MRGPRGQ86SM5 289 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 CD163Q86VB7 1156 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 ZNF808Q8N4W9 903 aaPredicted RBP13.94□□□□□ -0.18
LIMS3-201ENST00000437679 CLHC1Q8NHS4 586 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 ZFP28Q8NHY6 868 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 VSTM2LQ96N03 204 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 RILPQ96NA2 401 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 PHF12Q96QT6 1004 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 PAIP2Q9BPZ3 127 aaKnown RBP13.94□□□□□ -0.18
LIMS3-201ENST00000437679 ANGPTL4Q9BY76 406 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 ZNF703Q9H7S9 590 aaPredicted RBP13.94□□□□□ -0.18
LIMS3-201ENST00000437679 DDX18Q9NVP1 670 aaKnown RBP13.94□□□□□ -0.18
LIMS3-201ENST00000437679 QPCTLQ9NXS2 382 aa13.94□□□□□ -0.18
LIMS3-201ENST00000437679 C19orf53Q9UNZ5 99 aaPredicted RBP13.94□□□□□ -0.18
LIMS3-201ENST00000437679 TRGV5A0A0B4J1U4 118 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 OR14I1A6ND48 311 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 LRRC3CA6NJW4 275 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 NPIPA2E9PIF3 369 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 E9PLN8 166 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 NPIPA3F8WFD2 350 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 ITM2AO43736 263 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 SUSD5O60279 629 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 TBX19O60806 448 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 TRIM3O75382 744 aaPredicted RBP13.93□□□□□ -0.18
LIMS3-201ENST00000437679 NME6O75414 186 aaPredicted RBP13.93□□□□□ -0.18
LIMS3-201ENST00000437679 REM1O75628 298 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 CELA3AP09093 270 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 CT45A8P0DMV1 189 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 CT45A9P0DMV2 189 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 GDF1P27539 372 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 GPC1P35052 558 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 HPCAL1P37235 193 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 CASP3P42574 277 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 MAN2A2P49641 1150 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 CORO7P57737 925 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 HSPB3Q12988 150 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 MPP2Q14168 576 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 CT45A2Q5DJT8 189 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 BICRALQ6AI39 1079 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 ANKRD26P1Q6NSI1 321 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 SLC44A2Q8IWA5 706 aaPredicted RBP13.93□□□□□ -0.18
LIMS3-201ENST00000437679 KIRREL3Q8IZU9 778 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 LIX1Q8N485 282 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 ANKRD42Q8N9B4 389 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 ITLN2Q8WWU7 325 aaPredicted RBP13.93□□□□□ -0.18
LIMS3-201ENST00000437679 HGDQ93099 445 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 TMBIM1Q969X1 311 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 TUBGCP3Q96CW5 907 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 TMCO6Q96DC7 493 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 MTERF3Q96E29 417 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 ELP4Q96EB1 424 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 ZBED6CLQ96FA7 236 aaPredicted RBP13.93□□□□□ -0.18
LIMS3-201ENST00000437679 C3orf30Q96M34 536 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 COL21A1Q96P44 957 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 VKORC1Q9BQB6 163 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 GIMAP2Q9UG22 337 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.93□□□□□ -0.18
LIMS3-201ENST00000437679 RAP2CQ9Y3L5 183 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 OR10H1Q9Y4A9 318 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 LIPGQ9Y5X9 500 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 FREM3P0C091 2139 aa13.93□□□□□ -0.18
LIMS3-201ENST00000437679 A0A1B0GVC2 190 aa13.92□□□□□ -0.18
LIMS3-201ENST00000437679 OR6C70A6NIJ9 312 aa13.92□□□□□ -0.18
LIMS3-201ENST00000437679 UPK1AO00322 258 aa13.92□□□□□ -0.18
LIMS3-201ENST00000437679 AQP7O14520 342 aa13.92□□□□□ -0.18
LIMS3-201ENST00000437679 BCKDKO14874 412 aa13.92□□□□□ -0.18
LIMS3-201ENST00000437679 HCN1O60741 890 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 241.2 ms