RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 DPM1O60762 260 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 ZIC2O95409 532 aaPredicted RBP19.73■□□□□ 0.75
PTPRF-207ENST00000436724 IFNW1P05000 195 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 ALAS2P22557 587 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 MAGEA8P43361 318 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 ESRRGP62508 458 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 SKP1P63208 163 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 CHRNEQ04844 493 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 DUSP5Q16690 384 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 PEAR1Q5VY43 1037 aaPredicted RBP19.73■□□□□ 0.75
PTPRF-207ENST00000436724 C16orf62Q7Z3J2 963 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 ARHGAP22Q7Z5H3 698 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 CLVS1Q8IUQ0 354 aaPredicted RBP19.73■□□□□ 0.75
PTPRF-207ENST00000436724 LACC1Q8IV20 430 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 BBS10Q8TAM1 723 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 ZNF347Q96SE7 839 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 EPYCQ99645 322 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 GABARAPL1Q9H0R8 117 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 SLC38A1Q9H2H9 487 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 BCL2L10Q9HD36 194 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 FAM118AQ9NWS6 357 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 DHCR7Q9UBM7 475 aaKnown RBP19.73■□□□□ 0.75
PTPRF-207ENST00000436724 TTC28Q96AY4 2481 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 TNFRSF11BO00300 401 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 ADAMDEC1O15204 470 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 ASNA1O43681 348 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 IGFBP5P24593 272 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 AVPR1BP47901 424 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 PDX1P52945 283 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 MLIPQ5VWP3 458 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 CDC73Q6P1J9 531 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 WDR74Q6RFH5 385 aaPredicted RBP19.73■□□□□ 0.75
PTPRF-207ENST00000436724 ZNF574Q6ZN55 896 aaPredicted RBP19.73■□□□□ 0.75
PTPRF-207ENST00000436724 KRT73Q86Y46 540 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 D2HGDHQ8N465 521 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 EID2Q8N6I1 236 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 OR51Q1Q8NH59 317 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 SLC41A2Q96JW4 573 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 ZNF354BQ96LW1 612 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 YTHDF1Q9BYJ9 559 aaKnown RBP19.73■□□□□ 0.75
PTPRF-207ENST00000436724 CUTCQ9NTM9 273 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 ENPP4Q9Y6X5 453 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 WDFY3Q8IZQ1 3526 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 FFAR1O14842 300 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 OR10H2O60403 315 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 PLOD3O60568 738 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 EPPINO95925 133 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 ACP2P11117 423 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 ITGA2P17301 1181 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 MAOAP21397 527 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 OR1D4P47884 311 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 KCNC4Q03721 635 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 PMS2P3Q13401 168 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 NR0B2Q15466 257 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 FAM214AQ32MH5 1076 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 INAVAQ3KP66 663 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 OR6C4Q8NGE1 309 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.72■□□□□ 0.75
PTPRF-207ENST00000436724 ISOC1Q96CN7 298 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 PIP5K1AQ99755 562 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 SMOC1Q9H4F8 434 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 CAPN10Q9HC96 672 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 DNAAF2Q9NVR5 837 aaKnown RBP19.72■□□□□ 0.75
PTPRF-207ENST00000436724 GIN1Q9NXP7 522 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 NDOR1Q9UHB4 597 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 C3orf18Q9UK00 162 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 CLDN16Q9Y5I7 305 aa19.72■□□□□ 0.75
PTPRF-207ENST00000436724 DNAJB5O75953 348 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 SLC35E2P0CK97 266 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 RPS6KA3P51812 740 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 STX4Q12846 297 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 TRIM61Q5EBN2 209 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 ATAD3BQ5T9A4 648 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 KDM4DQ6B0I6 523 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 ATG16L2Q8NAA4 619 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 CTHRC1Q96CG8 243 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 NRBF2Q96F24 287 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 RDH12Q96NR8 316 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 MKLN1Q9UL63 735 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 FAM32AQ9Y421 112 aaKnown RBP19.71■□□□□ 0.75
PTPRF-207ENST00000436724 CFAP54Q96N23 3096 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 A0A0G2JPF8 293 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 A0A1W2PQM1 296 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 A8MVJ9 347 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 HNRNPCL2B2RXH8 293 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 HNRNPCL3B7ZW38 293 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 M0R3H8 397 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 HRKO00198 91 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 HYAL3O43820 417 aaPredicted RBP19.71■□□□□ 0.75
PTPRF-207ENST00000436724 HNRNPCL4P0DMR1 293 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 CYP4B1P13584 511 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 GNA13Q14344 377 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 EXOC3L2Q2M3D2 409 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 CCNJQ5T5M9 372 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 OR4C15Q8NGM1 316 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 TRNT1Q96Q11 434 aaKnown RBP19.71■□□□□ 0.75
PTPRF-207ENST00000436724 ALOXE3Q9BYJ1 711 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 PRTFDC1Q9NRG1 225 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 ACER3Q9NUN7 267 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 SEMA5BQ9P283 1151 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms