RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 METTL25Q8N6Q8 603 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 BHLHE22Q8NFJ8 381 aaPredicted RBP21.4■■□□□ 1.02
CPSF4-204ENST00000436336 C16orf52Q8NHV5 167 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 SLC9A6Q92581 669 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 LRGUKQ96M69 825 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 STACQ99469 402 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 WDR77Q9BQA1 342 aaPredicted RBP21.4■■□□□ 1.02
CPSF4-204ENST00000436336 LMF2Q9BU23 707 aaKnown RBP21.4■■□□□ 1.02
CPSF4-204ENST00000436336 TRIM15Q9C019 465 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 PIGUQ9H490 435 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 GORASP2Q9H8Y8 452 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 THSD1Q9NS62 852 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 COPS7AQ9UBW8 275 aa21.4■■□□□ 1.02
CPSF4-204ENST00000436336 TERTO14746 1132 aaKnown RBP21.39■■□□□ 1.01
CPSF4-204ENST00000436336 TFPTP0C1Z6 253 aa21.39■■□□□ 1.01
CPSF4-204ENST00000436336 POLE2P56282 527 aa21.39■■□□□ 1.01
CPSF4-204ENST00000436336 ZNHIT3Q15649 155 aaPredicted RBP21.39■■□□□ 1.01
CPSF4-204ENST00000436336 WDR53Q7Z5U6 358 aaPredicted RBP21.39■■□□□ 1.01
CPSF4-204ENST00000436336 DTX1Q86Y01 620 aa21.39■■□□□ 1.01
CPSF4-204ENST00000436336 B3GNT7Q8NFL0 401 aa21.39■■□□□ 1.01
CPSF4-204ENST00000436336 NFKBIDQ8NI38 313 aa21.39■■□□□ 1.01
CPSF4-204ENST00000436336 NKD1Q969G9 470 aa21.39■■□□□ 1.01
CPSF4-204ENST00000436336 OTUB1Q96FW1 271 aaPredicted RBP21.39■■□□□ 1.01
CPSF4-204ENST00000436336 SLC35A4Q96G79 324 aa21.39■■□□□ 1.01
CPSF4-204ENST00000436336 VSTM2LQ96N03 204 aa21.39■■□□□ 1.01
CPSF4-204ENST00000436336 DUSP22Q9NRW4 184 aa21.39■■□□□ 1.01
CPSF4-204ENST00000436336 EXD2Q9NVH0 621 aa21.39■■□□□ 1.01
CPSF4-204ENST00000436336 PPIEQ9UNP9 301 aaKnown RBP21.39■■□□□ 1.01
CPSF4-204ENST00000436336 TTC36A6NLP5 189 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 ATP6V1B2P21281 511 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 MMP11P24347 488 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 GPR143P51810 404 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 MYBPC3Q14896 1274 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 DUSP5Q16690 384 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 ATAD3BQ5T9A4 648 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 INTS11Q5TA45 600 aaKnown RBP21.38■■□□□ 1.01
CPSF4-204ENST00000436336 CYP2R1Q6VVX0 501 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 ZNF321PQ8N8H1 164 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 HIPK4Q8NE63 616 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 NFAM1Q8NET5 270 aaPredicted RBP21.38■■□□□ 1.01
CPSF4-204ENST00000436336 OR52E4Q8NGH9 312 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 SLC38A5Q8WUX1 472 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 NCLNQ969V3 563 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 C8orf44Q96CB5 159 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 NSMCE2Q96MF7 247 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 MESP1Q9BRJ9 268 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 NUDT9Q9BW91 350 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 LIPT1Q9Y234 373 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 ANGPT4Q9Y264 503 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 ZNF451Q9Y4E5 1061 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 PCDHGB3Q9Y5G1 929 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 HS3ST3B1Q9Y662 390 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 LOC101059948A0A1B0GTJ6 334 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 CREG1O75629 220 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 NKX2-2O95096 273 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 BCHEP06276 602 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 RPS18P62269 152 aaKnown RBP21.38■■□□□ 1.01
CPSF4-204ENST00000436336 CCNIQ14094 377 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 GNA13Q14344 377 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 SSPNQ14714 243 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 HEPHL1Q6MZM0 1159 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 SPPL2CQ8IUH8 684 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 KCND3Q9UK17 655 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 KCNE3Q9Y6H6 103 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 AK5Q9Y6K8 562 aa21.38■■□□□ 1.01
CPSF4-204ENST00000436336 PRAMEF27A3QJZ7 478 aa21.37■■□□□ 1.01
CPSF4-204ENST00000436336 AQP12BA6NM10 295 aa21.37■■□□□ 1.01
CPSF4-204ENST00000436336 OR6C76A6NM76 312 aa21.37■■□□□ 1.01
CPSF4-204ENST00000436336 C5orf58C9J3I9 102 aa21.37■■□□□ 1.01
CPSF4-204ENST00000436336 PSG6Q00889 435 aa21.37■■□□□ 1.01
CPSF4-204ENST00000436336 MTX3Q5HYI7 312 aa21.37■■□□□ 1.01
CPSF4-204ENST00000436336 REEP3Q6NUK4 255 aa21.37■■□□□ 1.01
CPSF4-204ENST00000436336 SLC44A2Q8IWA5 706 aaPredicted RBP21.37■■□□□ 1.01
CPSF4-204ENST00000436336 AQP12AQ8IXF9 295 aa21.37■■□□□ 1.01
CPSF4-204ENST00000436336 IL22RA1Q8N6P7 574 aa21.37■■□□□ 1.01
CPSF4-204ENST00000436336 CDS1Q92903 461 aa21.37■■□□□ 1.01
CPSF4-204ENST00000436336 FAM162AQ96A26 154 aa21.37■■□□□ 1.01
CPSF4-204ENST00000436336 NACC2Q96BF6 587 aa21.37■■□□□ 1.01
CPSF4-204ENST00000436336 TMEM19Q96HH6 336 aa21.37■■□□□ 1.01
CPSF4-204ENST00000436336 SEMA4CQ9C0C4 833 aa21.37■■□□□ 1.01
CPSF4-204ENST00000436336 DTX4Q9Y2E6 619 aa21.37■■□□□ 1.01
CPSF4-204ENST00000436336 PCDHGA6Q9Y5G7 932 aa21.37■■□□□ 1.01
CPSF4-204ENST00000436336 A0A1W2PQ72 361 aa21.36■■□□□ 1.01
CPSF4-204ENST00000436336 ENTPD5O75356 428 aa21.36■■□□□ 1.01
CPSF4-204ENST00000436336 SEC24DO94855 1032 aaPredicted RBP21.36■■□□□ 1.01
CPSF4-204ENST00000436336 NR2F1P10589 423 aa21.36■■□□□ 1.01
CPSF4-204ENST00000436336 FUT5Q11128 374 aa21.36■■□□□ 1.01
CPSF4-204ENST00000436336 FOXC1Q12948 553 aa21.36■■□□□ 1.01
CPSF4-204ENST00000436336 PCOLCEQ15113 449 aa21.36■■□□□ 1.01
CPSF4-204ENST00000436336 MAPK11Q15759 364 aa21.36■■□□□ 1.01
CPSF4-204ENST00000436336 SYPL1Q16563 259 aa21.36■■□□□ 1.01
CPSF4-204ENST00000436336 GPR151Q8TDV0 419 aa21.36■■□□□ 1.01
CPSF4-204ENST00000436336 NXPE2Q96DL1 559 aa21.36■■□□□ 1.01
CPSF4-204ENST00000436336 CFAP54Q96N23 3096 aa21.36■■□□□ 1.01
CPSF4-204ENST00000436336 ITPAQ9BY32 194 aa21.36■■□□□ 1.01
CPSF4-204ENST00000436336 ZNF700Q9H0M5 742 aa21.36■■□□□ 1.01
CPSF4-204ENST00000436336 IGHV1-45A0A0A0MS14 117 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 A8MVJ9 347 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 SLC28A2O43868 658 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 LIPCP11150 499 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms