RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 CDKN3Q16667 212 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 ANKRD55Q3KP44 614 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 UNC50Q53HI1 259 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 RIPPLY2Q5TAB7 128 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 ADAM5Q6NVV9 412 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 CWC27Q6UX04 472 aaKnown RBP2.57□□□□□ -2
HMGB1P27-201ENST00000431429 MCM10Q7L590 875 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 RPAINQ86UA6 219 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 KRTAP7-1Q8IUC3 87 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 CCDC36Q8IYA8 594 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 METTL4Q8N3J2 472 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 ARL6IP6Q8N6S5 226 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 ZNF781Q8N8C0 355 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 ZNF491Q8N8L2 437 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 MLKLQ8NB16 471 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 Q8NBF4 154 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 ZNF540Q8NDQ6 660 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 OR52B6Q8NGF0 335 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 CCDC110Q8TBZ0 833 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 HCAR2Q8TDS4 363 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 PCNPQ8WW12 178 aaKnown RBP2.57□□□□□ -2
HMGB1P27-201ENST00000431429 DLX4Q92988 240 aaPredicted RBP2.57□□□□□ -2
HMGB1P27-201ENST00000431429 SYAP1Q96A49 352 aaPredicted RBP2.57□□□□□ -2
HMGB1P27-201ENST00000431429 FICDQ9BVA6 458 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 DCTPP1Q9H773 170 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 NT5DC2Q9H857 520 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 WDR41Q9HAD4 459 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 KCNK13Q9HB14 408 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 VAT1LQ9HCJ6 419 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 SCRT2Q9NQ03 307 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 THEGQ9P2T0 379 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 BCAP29Q9UHQ4 241 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 BAIAP2L1Q9UHR4 511 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 SH3BGRL2Q9UJC5 107 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 EMCNQ9ULC0 261 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 ABCC4O15439 1325 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 NCOA2Q15596 1464 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 CCDC18Q5T9S5 1454 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 GON4LQ3T8J9 2241 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 SAMD9LQ8IVG5 1584 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 AHDC1Q5TGY3 1603 aaPredicted RBP2.57□□□□□ -2
HMGB1P27-201ENST00000431429 MYO5CQ9NQX4 1742 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 CACNA1FO60840 1977 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 IGLON5A6NGN9 336 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 KRTAP16-1A8MUX0 517 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 NEDD8-MDP1E9PL57 170 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 IMPA2O14732 288 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 DCXO43602 365 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 PEX11AO75192 247 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 VPS26AO75436 327 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 SEMA4FO95754 770 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 IGHG3P01860 377 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 NCF1P14598 390 aaPredicted RBP2.56□□□□□ -2
HMGB1P27-201ENST00000431429 IGFBP5P24593 272 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 DPP4P27487 766 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 ADSSP30520 456 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 ID1P41134 155 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 ATP12AP54707 1039 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 PPIAP62937 165 aaKnown RBP2.56□□□□□ -2
HMGB1P27-201ENST00000431429 TRA2BP62995 288 aaKnown RBP2.56□□□□□ -2
HMGB1P27-201ENST00000431429 SRPXP78539 464 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 ZNF85Q03923 595 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 ZP4Q12836 540 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 SIX1Q15475 284 aaPredicted RBP2.56□□□□□ -2
HMGB1P27-201ENST00000431429 CD226Q15762 336 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 MS4A18Q3C1V0 323 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 C2CD6Q53TS8 623 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 LDLRAP1Q5SW96 308 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 ZNF562Q6V9R5 426 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 MOB2Q70IA6 237 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 LHFPL4Q7Z7J7 247 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 LRRTM1Q86UE6 522 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 VPS36Q86VN1 386 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 FAM131BQ86XD5 332 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 CCDC71Q8IV32 467 aaPredicted RBP2.56□□□□□ -2
HMGB1P27-201ENST00000431429 FADS6Q8N9I5 356 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 WDR36Q8NI36 951 aaKnown RBP2.56□□□□□ -2
HMGB1P27-201ENST00000431429 FBXO25Q8TCJ0 367 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 SELENOMQ8WWX9 145 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 ADIPOR1Q96A54 375 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 CASD1Q96PB1 797 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 TNFRSF13CQ96RJ3 184 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 SYT11Q9BT88 431 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 GPR174Q9BXC1 333 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 KRTAP2-2Q9BYT5 123 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 OCR1Q9BZK8 76 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 CALHM2Q9HA72 323 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 NRN1Q9NPD7 142 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 GPR83Q9NYM4 423 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 CTSZQ9UBR2 303 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 IKZF3Q9UKT9 509 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 B9D1Q9UPM9 204 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 MFHAS1Q9Y4C4 1052 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 AP1M2Q9Y6Q5 423 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 SALL1Q9NSC2 1324 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 PLEKHG1Q9ULL1 1385 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 ARHGAP31Q2M1Z3 1444 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 BCL9LQ86UU0 1499 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 SAMD9Q5K651 1589 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 COL16A1Q07092 1604 aaPredicted RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms