RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 CSNK1G3Q9Y6M4 447 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 ZNF823P16415 610 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 TCN2P20062 427 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 FMO3P31513 532 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 TRAP1Q12931 704 aaKnown RBP12.21□□□□□ -0.45
PTCH1-207ENST00000429896 FADDQ13158 208 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 ZNF595Q8IYB9 648 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 RAB26Q9ULW5 256 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 MGAMO43451 1857 aa12.21□□□□□ -0.46
PTCH1-207ENST00000429896 TBX1O43435 398 aa12.21□□□□□ -0.46
PTCH1-207ENST00000429896 LDB3O75112 727 aa12.21□□□□□ -0.46
PTCH1-207ENST00000429896 ZCCHC12Q6PEW1 402 aa12.21□□□□□ -0.46
PTCH1-207ENST00000429896 ZNF550Q7Z398 422 aa12.21□□□□□ -0.46
PTCH1-207ENST00000429896 CST11Q9H112 138 aa12.21□□□□□ -0.46
PTCH1-207ENST00000429896 A0A1W2PQ72 361 aa12.21□□□□□ -0.46
PTCH1-207ENST00000429896 M0QX08 132 aa12.21□□□□□ -0.46
PTCH1-207ENST00000429896 HCRTR2O43614 444 aa12.21□□□□□ -0.46
PTCH1-207ENST00000429896 NR1H2P55055 460 aa12.21□□□□□ -0.46
PTCH1-207ENST00000429896 CCL7P80098 99 aa12.21□□□□□ -0.46
PTCH1-207ENST00000429896 EIF4EBP2Q13542 120 aaPredicted RBP12.21□□□□□ -0.46
PTCH1-207ENST00000429896 PLK5Q496M5 336 aa12.21□□□□□ -0.46
PTCH1-207ENST00000429896 YOD1Q5VVQ6 348 aaPredicted RBP12.21□□□□□ -0.46
PTCH1-207ENST00000429896 GATSQ8NAP1 163 aa12.21□□□□□ -0.46
PTCH1-207ENST00000429896 HIST1H2AAQ96QV6 131 aa12.21□□□□□ -0.46
PTCH1-207ENST00000429896 CD93Q9NPY3 652 aa12.21□□□□□ -0.46
PTCH1-207ENST00000429896 CENPMQ9NSP4 180 aa12.21□□□□□ -0.46
PTCH1-207ENST00000429896 DHCR7Q9UBM7 475 aaKnown RBP12.21□□□□□ -0.46
PTCH1-207ENST00000429896 WDR37Q9Y2I8 494 aa12.21□□□□□ -0.46
PTCH1-207ENST00000429896 H0YIV9 168 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 PRH1P02810 166 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 ICAM2P13598 275 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 DCTN2Q13561 401 aaKnown RBP12.2□□□□□ -0.46
PTCH1-207ENST00000429896 TMEM71Q6P5X7 295 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 OR9A2Q8NGT5 310 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 SNIP1Q8TAD8 396 aaKnown RBP12.2□□□□□ -0.46
PTCH1-207ENST00000429896 S100ZQ8WXG8 99 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 BMFQ96LC9 184 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 A0A1B0GX78 115 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 GREM1O60565 184 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 DHRS4L1P0CG22 281 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 LAMP1P11279 417 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 CSNK1G2P78368 415 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 LIN52Q52LA3 116 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 KIAA0907Q7Z7F0 614 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-207ENST00000429896 C1orf21Q9H246 121 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 SEC61A2Q9H9S3 476 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 IL1RAPQ9NPH3 570 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 C12orf4Q9NQ89 552 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 EEDO75530 441 aaKnown RBP12.2□□□□□ -0.46
PTCH1-207ENST00000429896 RAP2AP10114 183 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 HOXD12P35452 270 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 BCL6P41182 706 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 ACADVLP49748 655 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 PFN3P60673 137 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 RAB2AP61019 212 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.2□□□□□ -0.46
PTCH1-207ENST00000429896 GALNT15Q8N3T1 639 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 SPERTQ8NA61 448 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 EFHD2Q96C19 240 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-207ENST00000429896 ZFP3Q96NJ6 502 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 FAM86C1Q9NVL1 165 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 SMIM30A4D0T7 59 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 LILRA5A6NI73 299 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 J3QRK9 145 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 ZNF16P17020 682 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-207ENST00000429896 SLC5A2P31639 672 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 ETV4P43268 484 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 BPHLQ86WA6 291 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-207ENST00000429896 OR8J3Q8NGG0 315 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 NR4A3Q92570 626 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 MS4A4EQ96PG1 132 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 ACTRT3Q9BYD9 372 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 HOXD1Q9GZZ0 328 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 THSD1Q9NS62 852 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 PNPLA3Q9NST1 481 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 NEU3Q9UQ49 428 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 GFYI3L273 518 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 UGT2B11O75310 529 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 SYNGR4O95473 234 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 NPPBP16860 134 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 ACTR3P61158 418 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 PTGES3Q15185 160 aaKnown RBP12.2□□□□□ -0.46
PTCH1-207ENST00000429896 MAPK14Q16539 360 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 SPATS1Q496A3 300 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 KMT5CQ86Y97 462 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 OR10Q1Q8NGQ4 319 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 SGCDQ92629 289 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 FKBP7Q9Y680 259 aa12.2□□□□□ -0.46
PTCH1-207ENST00000429896 GPR37L1O60883 481 aa12.19□□□□□ -0.46
PTCH1-207ENST00000429896 CSTAP01040 98 aa12.19□□□□□ -0.46
PTCH1-207ENST00000429896 MYF5P13349 255 aa12.19□□□□□ -0.46
PTCH1-207ENST00000429896 ERV3-1Q14264 604 aa12.19□□□□□ -0.46
PTCH1-207ENST00000429896 KCNAB1Q14722 419 aa12.19□□□□□ -0.46
PTCH1-207ENST00000429896 WASH2PQ6VEQ5 465 aa12.19□□□□□ -0.46
PTCH1-207ENST00000429896 ZNF551Q7Z340 670 aaPredicted RBP12.19□□□□□ -0.46
PTCH1-207ENST00000429896 VWA5B2Q8N398 1253 aa12.19□□□□□ -0.46
PTCH1-207ENST00000429896 OR4C6Q8NH72 309 aa12.19□□□□□ -0.46
PTCH1-207ENST00000429896 TTYH2Q9BSA4 534 aa12.19□□□□□ -0.46
PTCH1-207ENST00000429896 TRBV11-1A0A0K0K1C0 115 aa12.19□□□□□ -0.46
PTCH1-207ENST00000429896 ANXA2P2A6NMY6 339 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms