RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 FRG2CA6NGY1 282 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 EEF1E1-BLOC1S5C9J1V9 151 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 EEF1E1O43324 174 aaKnown RBP15.57■□□□□ 0.08
TRIM39-209ENST00000428728 CTAG2O75638 210 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 CD1EP15812 388 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 NAGAP17050 411 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 ATP5F1P24539 256 aaPredicted RBP15.57■□□□□ 0.08
TRIM39-209ENST00000428728 TIMP3P35625 211 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 PPICP45877 212 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 EMDP50402 254 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 AGFG1P52594 562 aaKnown RBP15.57■□□□□ 0.08
TRIM39-209ENST00000428728 RAE1P78406 368 aaKnown RBP15.57■□□□□ 0.08
TRIM39-209ENST00000428728 HMGCS1Q01581 520 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 ACSM2AQ08AH3 577 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 ZNF628Q5EBL2 1059 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 NHSL2Q5HYW2 709 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 NSUN5P2Q63ZY6 315 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 ACSM2BQ68CK6 577 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 SLC30A6Q6NXT4 461 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 TMEM81Q6P7N7 255 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 TIFABQ6ZNK6 161 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 CCDC116Q8IYX3 515 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 OR9A2Q8NGT5 310 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 CDC26Q8NHZ8 85 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 METTL6Q8TCB7 284 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 RNASE6Q93091 150 aaKnown RBP15.57■□□□□ 0.08
TRIM39-209ENST00000428728 TMBIM1Q969X1 311 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 NTNG2Q96CW9 530 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 KCNA7Q96RP8 456 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 TIMM22Q9Y584 194 aa15.57■□□□□ 0.08
TRIM39-209ENST00000428728 PCNX3Q9H6A9 2034 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 CD8B2A6NJW9 211 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 SYT5O00445 386 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 RIPK2O43353 540 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 ULK1O75385 1050 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 REM1O75628 298 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 TACR1P25103 407 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 TIA1P31483 386 aaKnown RBP eCLIP15.56■□□□□ 0.08
TRIM39-209ENST00000428728 GCKP35557 465 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 IST1P53990 364 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 CORO7P57737 925 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 DCAF7P61962 342 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 BTKQ06187 659 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 RCAN2Q14206 197 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 SF3B4Q15427 424 aaKnown RBP eCLIP15.56■□□□□ 0.08
TRIM39-209ENST00000428728 ERCC6LQ2NKX8 1250 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 FLYWCH1Q4VC44 716 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 SPIN4Q56A73 249 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 SCIMPQ6UWF3 145 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 OR14L1PQ8NHC6 308 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 ZNF675Q8TD23 568 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 APIPQ96GX9 242 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 COL21A1Q96P44 957 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 CLEC4MQ9H2X3 399 aaPredicted RBP15.56■□□□□ 0.08
TRIM39-209ENST00000428728 EPB41L4BQ9H329 900 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 GIMAP4Q9NUV9 329 aa15.56■□□□□ 0.08
TRIM39-209ENST00000428728 ZNF629Q9UEG4 869 aaPredicted RBP15.56■□□□□ 0.08
TRIM39-209ENST00000428728 MBD3L4A6NDZ8 208 aaPredicted RBP15.55■□□□□ 0.08
TRIM39-209ENST00000428728 MBD3L3A6NE82 208 aaPredicted RBP15.55■□□□□ 0.08
TRIM39-209ENST00000428728 MBD3L5A6NJ08 208 aaPredicted RBP15.55■□□□□ 0.08
TRIM39-209ENST00000428728 H0Y3Z8 333 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 ACTL6AO96019 429 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 RHOXF2BP0C7M4 288 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 CYP4B1P13584 511 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 DRD2P14416 443 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 IMPDH1P20839 514 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 DRD5P21918 477 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 TCEA1P23193 301 aaKnown RBP15.55■□□□□ 0.08
TRIM39-209ENST00000428728 SRYQ05066 204 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 LCP2Q13094 533 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 SNTA1Q13424 505 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 POMZP3Q6PJE2 187 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 TRMT10CQ7L0Y3 403 aaKnown RBP15.55■□□□□ 0.08
TRIM39-209ENST00000428728 SLC22A9Q8IVM8 553 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 GBP7Q8N8V2 638 aaPredicted RBP15.55■□□□□ 0.08
TRIM39-209ENST00000428728 C9orf106Q8NAJ2 232 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 MBD3L2Q8NHZ7 208 aaPredicted RBP15.55■□□□□ 0.08
TRIM39-209ENST00000428728 C16orf78Q8WTQ4 265 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 BTBD9Q96Q07 612 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 ADOQ96SZ5 270 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 LIME1Q9H400 295 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 SENP1Q9P0U3 644 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 PSMC3IPQ9P2W1 217 aaPredicted RBP15.55■□□□□ 0.08
TRIM39-209ENST00000428728 TBK1Q9UHD2 729 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 EXO1Q9UQ84 846 aaKnown RBP15.55■□□□□ 0.08
TRIM39-209ENST00000428728 STK38LQ9Y2H1 464 aa15.55■□□□□ 0.08
TRIM39-209ENST00000428728 GPR55Q9Y2T6 319 aaPredicted RBP15.55■□□□□ 0.08
TRIM39-209ENST00000428728 PRRC2AP48634 2157 aaKnown RBP15.55■□□□□ 0.08
TRIM39-209ENST00000428728 OR6C70A6NIJ9 312 aa15.54■□□□□ 0.08
TRIM39-209ENST00000428728 TO15178 435 aa15.54■□□□□ 0.08
TRIM39-209ENST00000428728 ERN1O75460 977 aaKnown RBP15.54■□□□□ 0.08
TRIM39-209ENST00000428728 ENO1P06733 434 aaKnown RBP15.54■□□□□ 0.08
TRIM39-209ENST00000428728 PYGBP11216 843 aa15.54■□□□□ 0.08
TRIM39-209ENST00000428728 IL12BP29460 328 aa15.54■□□□□ 0.08
TRIM39-209ENST00000428728 KRT20P35900 424 aa15.54■□□□□ 0.08
TRIM39-209ENST00000428728 PEX19P40855 299 aa15.54■□□□□ 0.08
TRIM39-209ENST00000428728 SLCO1A2P46721 670 aa15.54■□□□□ 0.08
TRIM39-209ENST00000428728 DGKQP52824 942 aa15.54■□□□□ 0.08
TRIM39-209ENST00000428728 PRKAA2P54646 552 aa15.54■□□□□ 0.08
TRIM39-209ENST00000428728 PKNOX1P55347 436 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms