RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 DSC1Q08554 894 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 LRRC74AQ0VAA2 488 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 SEC23BQ15437 767 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 ZSWIM7Q19AV6 140 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 KIAA1211LQ6NV74 962 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 SLC30A6Q6NXT4 461 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 DEF8Q6ZN54 512 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 METTL23Q86XA0 190 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 NPAS3Q8IXF0 933 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 ZNF683Q8IZ20 524 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 C11orf24Q96F05 449 aaPredicted RBP15.2■□□□□ 0.02
C9orf3-206ENST00000428313 LRR1Q96L50 414 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 TMED9Q9BVK6 235 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 TINAGL1Q9GZM7 467 aaPredicted RBP15.2■□□□□ 0.02
C9orf3-206ENST00000428313 SCN8AQ9UQD0 1980 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 TRBV4-1A0A0J9YWV2 114 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 A0A1B0GUH1 482 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 OR2M5A3KFT3 312 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 CHST10O43529 356 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 LIMS3P0CW19 117 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 LIMS4P0CW20 117 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 ITGB8P26012 769 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 MMP15P51511 669 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 MVDP53602 400 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 SEC61A1P61619 476 aaKnown RBP15.2■□□□□ 0.02
C9orf3-206ENST00000428313 SPOUT1Q5T280 376 aaKnown RBP15.2■□□□□ 0.02
C9orf3-206ENST00000428313 GSG1LQ6UXU4 331 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 PGAP1Q75T13 922 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 TMEM86AQ8N2M4 240 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 SAMD12Q8N8I0 201 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 PXT1Q8NFP0 134 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 SETD7Q8WTS6 366 aaKnown RBP15.2■□□□□ 0.02
C9orf3-206ENST00000428313 ORAI1Q96D31 301 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 NARS2Q96I59 477 aaKnown RBP15.2■□□□□ 0.02
C9orf3-206ENST00000428313 EBPLQ9BY08 206 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 POLR2J3Q9H1A7 115 aaKnown RBP15.2■□□□□ 0.02
C9orf3-206ENST00000428313 RSPH9Q9H1X1 276 aaPredicted RBP15.2■□□□□ 0.02
C9orf3-206ENST00000428313 TBC1D17Q9HA65 648 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 DNAJC11Q9NVH1 559 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 TRBC2A0A5B9 178 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 FAM227AF5H4B4 570 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 SCAMP2O15127 329 aaKnown RBP15.19■□□□□ 0.02
C9orf3-206ENST00000428313 OR2A4O95047 310 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 EPORP19235 508 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 DGKAP23743 735 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 THBS2P35442 1172 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 HNF1BP35680 557 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 CRATP43155 626 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 HTR4Q13639 388 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 PTPRRQ15256 657 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 SLC25A25Q6KCM7 469 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 HAGHLQ6PII5 290 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-206ENST00000428313 CAMKMTQ7Z624 323 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 TSPAN33Q86UF1 283 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 ZFP41Q8N8Y5 198 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 NFKBIDQ8NI38 313 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 KAT2AQ92830 837 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 RNFT2Q96EX2 444 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 OR2A7Q96R45 310 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 PTDSS2Q9BVG9 487 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 IFT27Q9BW83 186 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 CHIAQ9BZP6 476 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 MTG2Q9H4K7 406 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 MROH8Q9H579 483 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 SLC6A20Q9NP91 592 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 MYEF2Q9P2K5 600 aaKnown RBP15.19■□□□□ 0.02
C9orf3-206ENST00000428313 MGAT4CQ9UBM8 478 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 TEX46H3BTG2 121 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 H7C0S8 307 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 ST8SIA5O15466 376 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 ADAM12O43184 909 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 PRODHO43272 600 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 S100A9P06702 114 aaKnown RBP15.19■□□□□ 0.02
C9orf3-206ENST00000428313 PVALBP20472 110 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-206ENST00000428313 GPR143P51810 404 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 ARHGDIBP52566 201 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 EFNB1P98172 346 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 PITPNAQ00169 270 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 CRHR2Q13324 411 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 SERINC3Q13530 473 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 ZC3H14Q6PJT7 736 aaKnown RBP15.19■□□□□ 0.02
C9orf3-206ENST00000428313 LBX2Q6XYB7 198 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 JAZF1Q86VZ6 243 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 C12orf40Q86WS4 652 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 HJURPQ8NCD3 748 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-206ENST00000428313 ARRDC4Q8NCT1 418 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 GLYATL2Q8WU03 294 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 TCEAL4Q96EI5 215 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 SLC32A1Q9H598 525 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 EXOSC3Q9NQT5 275 aaKnown RBP15.19■□□□□ 0.02
C9orf3-206ENST00000428313 KLK14Q9P0G3 267 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 CFAP97Q9P2B7 532 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 RHCGQ9UBD6 479 aa15.19■□□□□ 0.02
C9orf3-206ENST00000428313 TNS1Q9HBL0 1735 aaKnown RBP15.19■□□□□ 0.02
C9orf3-206ENST00000428313 SULT1C2O00338 296 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 PRAMEF2O60811 474 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 SC5DO75845 299 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 ATG12O94817 140 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 TRBC1P01850 177 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 ETFAP13804 333 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms