RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 EMP3P54852 163 aa10.08□□□□□ -0.8
TCOF1-204ENST00000427724 RAB25P57735 213 aa10.08□□□□□ -0.8
TCOF1-204ENST00000427724 ARF3P61204 181 aaPredicted RBP10.08□□□□□ -0.8
TCOF1-204ENST00000427724 MAT1AQ00266 395 aaKnown RBP10.08□□□□□ -0.8
TCOF1-204ENST00000427724 CD47Q08722 323 aa10.08□□□□□ -0.8
TCOF1-204ENST00000427724 GANABQ14697 944 aaKnown RBP10.08□□□□□ -0.8
TCOF1-204ENST00000427724 NHSL2Q5HYW2 709 aa10.08□□□□□ -0.8
TCOF1-204ENST00000427724 IL20RBQ6UXL0 311 aa10.08□□□□□ -0.8
TCOF1-204ENST00000427724 HDDC2Q7Z4H3 204 aa10.08□□□□□ -0.8
TCOF1-204ENST00000427724 RAB8BQ92930 207 aa10.08□□□□□ -0.8
TCOF1-204ENST00000427724 GUCD1Q96NT3 240 aa10.08□□□□□ -0.8
TCOF1-204ENST00000427724 FARSBQ9NSD9 589 aaKnown RBP10.08□□□□□ -0.8
TCOF1-204ENST00000427724 WDR45Q9Y484 360 aa10.08□□□□□ -0.8
TCOF1-204ENST00000427724 CACNA1AO00555 2505 aa10.08□□□□□ -0.8
TCOF1-204ENST00000427724 LMO7DNF2Z398 122 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 PIAS2O75928 621 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 IFNW1P05000 195 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 C7P10643 843 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 BCKDHAP12694 445 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 ACADLP28330 430 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 SPCS2Q15005 226 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 COQ5Q5HYK3 327 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 HES3Q5TGS1 186 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 C6orf15Q6UXA7 325 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-204ENST00000427724 ADAMTSL4Q6UY14 1074 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 HUS1BQ8NHY5 278 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 RASSF5Q8WWW0 418 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 TCTN2Q96GX1 697 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 DIRAS2Q96HU8 199 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 MKKSQ9NPJ1 570 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-204ENST00000427724 C1GALT1Q9NS00 363 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 PAK1IP1Q9NWT1 392 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-204ENST00000427724 ANKRD10Q9NXR5 420 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 C5AR2Q9P296 337 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 AASSQ9UDR5 926 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 RPH3AQ9Y2J0 694 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-204ENST00000427724 NAALAD2Q9Y3Q0 740 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 ZNF451Q9Y4E5 1061 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 CORINQ9Y5Q5 1042 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 FAM92AA1XBS5 289 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 IL3P08700 152 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 ZNF888P0CJ79 500 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-204ENST00000427724 DNAJA1P31689 397 aaKnown RBP10.07□□□□□ -0.8
TCOF1-204ENST00000427724 GSTM5P46439 218 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 PRLHRP49683 370 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 SPATS1Q496A3 300 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 PRR22Q8IZ63 422 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 C19orf47Q8N9M1 422 aaKnown RBP10.07□□□□□ -0.8
TCOF1-204ENST00000427724 GOLM1Q8NBJ4 401 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 OR8J3Q8NGG0 315 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 LGALS12Q96DT0 336 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 ALPK1Q96QP1 1244 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 PELOQ9BRX2 385 aaKnown RBP10.07□□□□□ -0.8
TCOF1-204ENST00000427724 SLC35A5Q9BS91 424 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 ZNF624Q9P2J8 865 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-204ENST00000427724 CD300AQ9UGN4 299 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 FBXO4Q9UKT5 387 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 IFT52Q9Y366 437 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 CCDC187A0A096LP49 1063 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 SPTY2D1-AS1A0A0U1RR47 76 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 WWP2O00308 870 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 PLRG1O43660 514 aaKnown RBP10.07□□□□□ -0.8
TCOF1-204ENST00000427724 TPOP07202 933 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 RPS17P08708 135 aaKnown RBP10.07□□□□□ -0.8
TCOF1-204ENST00000427724 ATXN1LP0C7T5 689 aaKnown RBP10.07□□□□□ -0.8
TCOF1-204ENST00000427724 TCF3P15923 654 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 UGT2B7P16662 529 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 PRKACBP22694 351 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 RORAP35398 523 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 ZNF763Q0D2J5 394 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 SELPLGQ14242 412 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 TIGD6Q17RP2 521 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 AGBL4Q5VU57 503 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 GUSBP11Q6P575 273 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 IQCHQ86VS3 1027 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 ZADH2Q8N4Q0 377 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 ESX1Q8N693 406 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 GALNT6Q8NCL4 622 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 LILRB4Q8NHJ6 448 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 NDNFQ8TB73 568 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 TMCO6Q96DC7 493 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 SLC29A3Q9BZD2 475 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 TCEAL2Q9H3H9 227 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-204ENST00000427724 TPT1P8Q9HAU6 139 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 KCMF1Q9P0J7 381 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 WNK3Q9BYP7 1800 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 OTOL1A6NHN0 477 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-204ENST00000427724 C17orf105B2RV13 164 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 GLB1P16278 677 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 SCN1BQ07699 218 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 MZT2BQ6NZ67 158 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 OR8H3Q8N146 312 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 PROKR1Q8TCW9 393 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 CD200R1Q8TD46 325 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 NUDT8Q8WV74 236 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 POP5Q969H6 163 aaKnown RBP10.07□□□□□ -0.8
TCOF1-204ENST00000427724 HSH2DQ96JZ2 352 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 TEX37Q96LM6 180 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 SFXN2Q96NB2 322 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 LRRC3BQ96PB8 259 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms