RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 OTULINQ96BN8 352 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 OTUB2Q96DC9 234 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 OR52A5Q9H2C5 316 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 NINQ8N4C6 2090 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 KIAA1549LQ6ZVL6 1849 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 A0A0G2JMP0 313 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 LINC00854A0A1B0GVQ3 168 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 C7orf66A4D0T2 115 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 INMT-MINDY4F8WBC2 141 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 HPGDSO60760 199 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 EPPINO95925 133 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 HMGN1P05114 100 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 CTSLP07711 333 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 OR12D1P0DN82 309 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 LAG3P18627 525 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 FPR3P25089 353 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 SLC6A1P30531 599 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 HTR1FP30939 366 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 IFNA8P32881 189 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 CCR8P51685 355 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 AP2S1P53680 142 aaPredicted RBP14.33□□□□□ -0.12
C9orf3-204ENST00000424143 RPS26P62854 115 aaKnown RBP14.33□□□□□ -0.12
C9orf3-204ENST00000424143 GPLD1P80108 840 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 MRPL28Q13084 256 aaKnown RBP14.33□□□□□ -0.12
C9orf3-204ENST00000424143 TRAM1Q15629 374 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 ESCO2Q56NI9 601 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 OR2G6Q5TZ20 316 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 CELF5Q8N6W0 485 aaKnown RBP14.33□□□□□ -0.12
C9orf3-204ENST00000424143 TMEM203Q969S6 136 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 GPA33Q99795 319 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 PRR14Q9BWN1 585 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 OR51I1Q9H343 314 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 PIGUQ9H490 435 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 EMC7Q9NPA0 242 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 CYSLTR2Q9NS75 346 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 IL20Q9NYY1 176 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 CALML5Q9NZT1 146 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 COMMD3Q9UBI1 195 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 CARD8Q9Y2G2 431 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 AUP1Q9Y679 476 aa14.33□□□□□ -0.12
C9orf3-204ENST00000424143 DNMT3AQ9Y6K1 912 aaPredicted RBP14.33□□□□□ -0.12
C9orf3-204ENST00000424143 A0A087WUU8 490 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 TEX51A0A1B0GUA7 166 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 LINC00862A6NCI5 91 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 J3QRE1 110 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 GABRPO00591 440 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 TEX28O15482 410 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 NDUFB5O43674 189 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 CLEC3AO75596 197 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 POP7O75817 140 aaKnown RBP14.32□□□□□ -0.12
C9orf3-204ENST00000424143 CRYZL1O95825 349 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 LRG1P02750 347 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 PSKH1P11801 424 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 SYN1P17600 705 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 SLC6A11P48066 632 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 RAG2P55895 527 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 SYPL1Q16563 259 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 DECR1Q16698 335 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 TMEM35AQ53FP2 167 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 PLA1AQ53H76 456 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 LILRA6Q6PI73 481 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 LRRC28Q86X40 367 aaPredicted RBP14.32□□□□□ -0.12
C9orf3-204ENST00000424143 MARCH9Q86YJ5 346 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 SYT14Q8NB59 555 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 OR6T1Q8NGN1 323 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 SNAPC3Q92966 411 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 SENP5Q96HI0 755 aaPredicted RBP14.32□□□□□ -0.12
C9orf3-204ENST00000424143 AMDHD1Q96NU7 426 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 TM9SF2Q99805 663 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 WFDC6Q9BQY6 131 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 FAIM2Q9BWQ8 316 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 KCNN2Q9H2S1 579 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 B3GAT2Q9NPZ5 323 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 LHX9Q9NQ69 397 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 SPHK2Q9NRA0 654 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 TOR4AQ9NXH8 423 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 SATB2Q9UPW6 733 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 CLCA2Q9UQC9 943 aa14.32□□□□□ -0.12
C9orf3-204ENST00000424143 YARS2Q9Y2Z4 477 aaKnown RBP14.32□□□□□ -0.12
C9orf3-204ENST00000424143 A0A0A6YYD5 115 aa14.31□□□□□ -0.12
C9orf3-204ENST00000424143 M0R3H8 397 aa14.31□□□□□ -0.12
C9orf3-204ENST00000424143 KLF4O43474 513 aa14.31□□□□□ -0.12
C9orf3-204ENST00000424143 CPNE3O75131 537 aaKnown RBP14.31□□□□□ -0.12
C9orf3-204ENST00000424143 PBLDP30039 288 aaPredicted RBP14.31□□□□□ -0.12
C9orf3-204ENST00000424143 DGKEP52429 567 aa14.31□□□□□ -0.12
C9orf3-204ENST00000424143 EPHA5P54756 1037 aa14.31□□□□□ -0.12
C9orf3-204ENST00000424143 ST3GAL3Q11203 375 aa14.31□□□□□ -0.12
C9orf3-204ENST00000424143 IL18Q14116 193 aa14.31□□□□□ -0.12
C9orf3-204ENST00000424143 CADM2Q8N3J6 435 aa14.31□□□□□ -0.12
C9orf3-204ENST00000424143 VN1R2Q8NFZ6 395 aa14.31□□□□□ -0.12
C9orf3-204ENST00000424143 TTLQ8NG68 377 aa14.31□□□□□ -0.12
C9orf3-204ENST00000424143 OR56A1Q8NGH5 318 aa14.31□□□□□ -0.12
C9orf3-204ENST00000424143 OR5M3Q8NGP4 307 aa14.31□□□□□ -0.12
C9orf3-204ENST00000424143 NEIL3Q8TAT5 605 aa14.31□□□□□ -0.12
C9orf3-204ENST00000424143 PIGXQ8TBF5 258 aa14.31□□□□□ -0.12
C9orf3-204ENST00000424143 RAET1EQ8TD07 263 aa14.31□□□□□ -0.12
C9orf3-204ENST00000424143 WFIKKN2Q8TEU8 576 aa14.31□□□□□ -0.12
C9orf3-204ENST00000424143 UPRTQ96BW1 309 aa14.31□□□□□ -0.12
C9orf3-204ENST00000424143 GPR137Q96N19 417 aa14.31□□□□□ -0.12
C9orf3-204ENST00000424143 F2RL3Q96RI0 385 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms