RNA–Protein interactions for RNA: ENST00000419314.5

CCT6P3-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 3,702 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-201ENST00000419314 SIX5Q8N196 739 aa13□□□□□ -0.33
CCT6P3-201ENST00000419314 C10orf53Q8N6V4 93 aa13□□□□□ -0.33
CCT6P3-201ENST00000419314 SLC7A13Q8TCU3 470 aa13□□□□□ -0.33
CCT6P3-201ENST00000419314 TBC1D20Q96BZ9 403 aa13□□□□□ -0.33
CCT6P3-201ENST00000419314 TPK1Q9H3S4 243 aa13□□□□□ -0.33
CCT6P3-201ENST00000419314 EPS8L2Q9H6S3 715 aa13□□□□□ -0.33
CCT6P3-201ENST00000419314 PAK1IP1Q9NWT1 392 aaPredicted RBP13□□□□□ -0.33
CCT6P3-201ENST00000419314 MGAT4BQ9UQ53 548 aa13□□□□□ -0.33
CCT6P3-201ENST00000419314 NTNG1Q9Y2I2 539 aa13□□□□□ -0.33
CCT6P3-201ENST00000419314 BCAS1O75363 584 aaPredicted RBP12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 SKP1P63208 163 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 DGUOKQ16854 277 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 ZNF425Q6IV72 752 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 OR7G2Q8NG99 324 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 RPL3LQ92901 407 aaKnown RBP12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 MSLNLQ96KJ4 702 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 HRASLS5Q96KN8 279 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 Q96MT0 163 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 MAP3K3Q99759 626 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 TOR4AQ9NXH8 423 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 KLF15Q9UIH9 416 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 PCDHGA10Q9Y5H3 936 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 KNTC1P50748 2209 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 C2orf16Q68DN1 1984 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 ASCC3Q8N3C0 2202 aaKnown RBP12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 FAAHO00519 579 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 CLDN4O14493 209 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 SAGP10523 405 aaPredicted RBP12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 CD38P28907 300 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 NOS3P29474 1203 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 GPR4P46093 362 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 GABARAPL2P60520 117 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 TNFRSF17Q02223 184 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 SRSF5Q13243 272 aaKnown RBP12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 ARMCX4Q5H9R4 360 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 MCATQ8IVS2 390 aaKnown RBP12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 GALNT12Q8IXK2 581 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 SIMC1Q8NDZ2 872 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 OR13F1Q8NGS4 319 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 PIGXQ8TBF5 258 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 AICDAQ9GZX7 198 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 CHST8Q9H2A9 424 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 PLGRKTQ9HBL7 147 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 GPR52Q9Y2T5 361 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 CACNA1CQ13936 2221 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 A0A0G2JPF8 293 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 EFCAB9A8MZ26 197 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 HNRNPCL2B2RXH8 293 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 HNRNPCL3B7ZW38 293 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 PROS1P07225 676 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 HNRNPCL4P0DMR1 293 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 CDK4P11802 303 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 CPMP14384 443 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 PDX1P52945 283 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 NDUFA9Q16795 377 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 KLHL17Q6TDP4 642 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 B4GALNT2Q8NHY0 566 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 HSPBAP1Q96EW2 488 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 TUBA1CQ9BQE3 449 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 SERHL2Q9H4I8 314 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 THSD1Q9NS62 852 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 DAPP1Q9UN19 280 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 TSC22D4Q9Y3Q8 395 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 ENTPD2Q9Y5L3 495 aa12.99□□□□□ -0.33
CCT6P3-201ENST00000419314 SPTY2D1-AS1A0A0U1RR47 76 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 PRAMEF25A6NGN4 478 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 TMBIM6P55061 237 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 TUBA3CQ13748 450 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 NR1D2Q14995 579 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 ZIC1Q15915 447 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 FAHD1Q6P587 224 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 GKN2Q86XP6 184 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 CDK20Q8IZL9 346 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 FAM46AQ96IP4 442 aaKnown RBP12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 SLC2A4RGQ9NR83 387 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 RPS6KB2Q9UBS0 482 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 LIPT1Q9Y234 373 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 ALPK2Q86TB3 2170 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 MYL12AP19105 171 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 ELAVL4P26378 380 aaKnown RBP12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 SEC23BQ15437 767 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 KLHL12Q53G59 568 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 NKAIN2Q5VXU1 208 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 PTCRAQ6ISU1 281 aaPredicted RBP12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 HSDL2Q6YN16 418 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 MOAP1Q96BY2 351 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 SLC38A2Q96QD8 506 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 OR2A5Q96R48 311 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 WSB2Q9NYS7 404 aaPredicted RBP12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 SLCO1B1Q9Y6L6 691 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 HSPE1-MOB4S4R3N1 261 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 A8MVJ9 347 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 MBTPS2O43462 519 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 ZNF217O75362 1048 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 PCBP3P57721 371 aaKnown RBP12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 ST3GAL3Q11203 375 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 EIF2B5Q13144 721 aaKnown RBP12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 C1DQ13901 141 aaKnown RBP12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 CCINQ13939 588 aa12.98□□□□□ -0.33
CCT6P3-201ENST00000419314 SPCS2Q15005 226 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms