RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 MAN2C1Q9NTJ4 1040 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 FKBP14Q9NWM8 211 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 MAT2BQ9NZL9 334 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 SEMA5BQ9P283 1151 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 RNF6Q9Y252 685 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 TPRKBQ9Y3C4 175 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 KCNE3Q9Y6H6 103 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 CSNK1G3Q9Y6M4 447 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 SEC16AO15027 2179 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 RP1P56715 2156 aa8.48□□□□□ -1.05
LINCMD1-201ENST00000418518 CCDC163A0A0D9SF12 145 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 SH3PXD2BA1X283 911 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 ZNF860A6NHJ4 632 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 SLC9B1P1A6NJY1 282 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 PCDHGA12O60330 932 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 SOX30O94993 753 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 NSA2O95478 260 aaKnown RBP8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 AK1P00568 194 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 ALPPP05187 535 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 THBS1P07996 1170 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 SLC35E2P0CK97 266 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 BCKDHBP21953 392 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 KRT20P35900 424 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 PRKAG1P54619 331 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 SHC2P98077 582 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 ALDH6A1Q02252 535 aaKnown RBP8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 MVKQ03426 396 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 ILKQ13418 452 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 GANABQ14697 944 aaKnown RBP8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 SEC23BQ15437 767 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 NDUFA9Q16795 377 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 PRICKLE4Q2TBC4 344 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 DCST1Q5T197 706 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 KLHL17Q6TDP4 642 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 RBM45Q8IUH3 476 aaKnown RBP8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 ERI1Q8IV48 349 aaKnown RBP8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 DEPDC4Q8N2C3 294 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 AQP11Q8NBQ7 271 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 OR6C4Q8NGE1 309 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 ADAMTS15Q8TE58 950 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 SGCDQ92629 289 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 DIO2Q92813 273 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 ISOC1Q96CN7 298 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 NMD3Q96D46 503 aaKnown RBP8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 NODALQ96S42 347 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 MAP3K3Q99759 626 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 BCL7BQ9BQE9 202 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 WFDC6Q9BQY6 131 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 YIPF4Q9BSR8 244 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 POLR2J2Q9GZM3 115 aaKnown RBP8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 ZNF350Q9GZX5 532 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 POLR2J3Q9H1A7 115 aaKnown RBP8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 EVA1AQ9H8M9 152 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 ZNF556Q9HAH1 456 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 CXorf21Q9HAI6 301 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 ANKHQ9HCJ1 492 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 POLE3Q9NRF9 147 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 TMCC3Q9ULS5 477 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 CHST2Q9Y4C5 530 aa8.47□□□□□ -1.05
LINCMD1-201ENST00000418518 CHST10O43529 356 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 FOXS1O43638 330 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 XPNPEP2O43895 674 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 KIAA0513O60268 411 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 MPZL2O60487 215 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 RDH16O75452 317 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 TRMUO75648 421 aaKnown RBP8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 UGT2B17O75795 530 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 MED26O95402 600 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 TP53P04637 393 aaPredicted RBP8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 EIF2S1P05198 315 aaKnown RBP8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 RNH1P13489 461 aaKnown RBP8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 OSMP13725 252 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 EEF1B2P24534 225 aaKnown RBP8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 MAOBP27338 520 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 FMO3P31513 532 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 GCGRP47871 477 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 CXCL12P48061 93 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 PDX1P52945 283 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 CRISP1P54107 249 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 UGT2B15P54855 530 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 TMBIM6P55061 237 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 OLR1P78380 273 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 IL1RL1Q01638 556 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 ROR2Q01974 943 aaKnown RBP8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 CHRNEQ04844 493 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 MAP4K2Q12851 820 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 DUSP8Q13202 625 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 DUSP5Q16690 384 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 DEFB110Q30KQ9 67 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 GPAT3Q53EU6 434 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 TCTE1Q5JU00 501 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 WDR45BQ5MNZ6 344 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 TMEM201Q5SNT2 666 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 C6orf132Q5T0Z8 1188 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 SLX4IPQ5VYV7 408 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 TYW3Q6IPR3 259 aaKnown RBP8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 PGBD2Q6P3X8 592 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 DEF8Q6ZN54 512 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 PRSS48Q7RTY5 328 aa8.46□□□□□ -1.06
LINCMD1-201ENST00000418518 C16orf62Q7Z3J2 963 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms