RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 TMEM8BA6NDV4 472 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 SDR42E2A6NKP2 422 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 TRPC5OSA6NMA1 111 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 EVPLLA8MZ36 301 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 H0YIZ8 118 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 TRIM77I1YAP6 450 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 PSMD9O00233 223 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 PRMT5O14744 637 aaPredicted RBP4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 MAGEB3O15480 346 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 RAD51CO43502 376 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 DUX1O43812 170 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 SNX3O60493 162 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 BANF1O75531 89 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 AP2A2O94973 939 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 VAPBO95292 243 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 RASAL1O95294 804 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 CPNE6O95741 557 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 BAG2O95816 211 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 VIPP01282 170 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 PROS1P07225 676 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 SLC35G4P0C7Q5 338 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 HPGDP15428 266 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 ITGA2P17301 1181 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 XRCC1P18887 633 aaPredicted RBP4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 TNFSF4P23510 183 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 GSTM2P28161 218 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 CD1CP29017 333 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 CCKBRP32239 447 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 NSG1P42857 185 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 MAPK9P45984 424 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 ARCN1P48444 511 aaKnown RBP4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 PPM1FP49593 454 aaPredicted RBP4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 TTPAP49638 278 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 ITGA8P53708 1063 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 TIAL1Q01085 375 aaKnown RBP eCLIP4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 CFHR1Q03591 330 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 C2orf54Q08AI8 447 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 ASPHQ12797 758 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 STX3Q13277 289 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 DHX34Q14147 1143 aaKnown RBP4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 GPR18Q14330 331 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 CLCA4Q14CN2 919 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 MORF4L2Q15014 288 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 RPE65Q16518 533 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 TYSND1Q2T9J0 566 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 ANKRD20A4Q4UJ75 823 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 ZNF658BQ4V348 819 aaPredicted RBP4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 FASTKD1Q53R41 847 aaKnown RBP4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 LYPLAL1Q5VWZ2 237 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 NKAIN2Q5VXU1 208 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 KIAA0930Q6ICG6 404 aaPredicted RBP4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 SHQ1Q6PI26 577 aaKnown RBP4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 CERS6Q6ZMG9 384 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 LINC00299Q6ZSB3 139 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 TMEM26Q6ZUK4 368 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 HDDC2Q7Z4H3 204 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 C1QL2Q7Z5L3 287 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 PIM3Q86V86 326 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 CCDC25Q86WR0 208 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 ELMOD2Q8IZ81 293 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 LINC00518Q8N0U6 118 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 CLYBLQ8N0X4 340 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 SPATA4Q8NEY3 305 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 OR8H1Q8NGG4 311 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 OR10G6Q8NH81 332 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 CEP70Q8NHQ1 597 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 TEX47Q8TBZ9 253 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 FANK1Q8TC84 345 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 LKAAEAR1Q8TD35 194 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 DPF1Q92782 380 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 CXorf40BQ96DE9 158 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 RMND5BQ96G75 393 aaPredicted RBP4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 RBM18Q96H35 190 aaKnown RBP4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 LINC00615Q96LM1 132 aaPredicted RBP4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 C12orf66Q96MD2 445 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 C7orf26Q96N11 449 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 BBS4Q96RK4 519 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 CCM2Q9BSQ5 444 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 C9orf16Q9BUW7 83 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 TBC1D10AQ9BXI6 508 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 MRPS26Q9BYN8 205 aaKnown RBP4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 TRIM31Q9BZY9 425 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 WWP1Q9H0M0 922 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 STN1Q9H668 368 aaKnown RBP4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 COG4Q9H9E3 785 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 VPS37BQ9H9H4 285 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 EPB41L5Q9HCM4 733 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 POT1Q9NUX5 634 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 TMEM9Q9P0T7 183 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 ZNF624Q9P2J8 865 aaPredicted RBP4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 EXTL2Q9UBQ6 330 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 NKX1-2Q9UD57 310 aaPredicted RBP4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 ACSL5Q9ULC5 683 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 TDRKHQ9Y2W6 561 aaKnown RBP4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 MAD1L1Q9Y6D9 718 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 SCN2AQ99250 2005 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 DNAJC13O75165 2243 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 DOPEY2Q9Y3R5 2298 aa4.6□□□□□ -1.67
ATG4AP1-201ENST00000416893 MAST4O15021 2626 aa4.59□□□□□ -1.67
ATG4AP1-201ENST00000416893 TENM4Q6N022 2769 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms