RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 CSNK2A2P19784 350 aaPredicted RBP17.55■□□□□ 0.4
UBXN4-202ENST00000415164 MRPS35P82673 323 aaKnown RBP17.55■□□□□ 0.4
UBXN4-202ENST00000415164 TRMT12Q53H54 448 aaKnown RBP17.55■□□□□ 0.4
UBXN4-202ENST00000415164 TECRLQ5HYJ1 363 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 Q5PR19 223 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 AAGABQ6PD74 315 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 RPS27LQ71UM5 84 aaKnown RBP17.55■□□□□ 0.4
UBXN4-202ENST00000415164 MILR1Q7Z6M3 343 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 PLD6Q8N2A8 252 aaKnown RBP17.55■□□□□ 0.4
UBXN4-202ENST00000415164 METTL4Q8N3J2 472 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 CNEP1R1Q8N9A8 125 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 WDSUB1Q8N9V3 476 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 WNT2BQ93097 391 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 TMBIM1Q969X1 311 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 TMCO6Q96DC7 493 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 ZFP3Q96NJ6 502 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 FAM111AQ96PZ2 611 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 OR2B2Q9GZK3 357 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 PIGMQ9H3S5 423 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 FARSBQ9NSD9 589 aaKnown RBP17.55■□□□□ 0.4
UBXN4-202ENST00000415164 FETUBQ9UGM5 382 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 ADAM29Q9UKF5 820 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 PACSIN3Q9UKS6 424 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 PSME2Q9UL46 239 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 ZNF780BQ9Y6R6 833 aa17.55■□□□□ 0.4
UBXN4-202ENST00000415164 CCDC189A1A4V9 331 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 PLOD2O00469 737 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 SMAD7O15105 426 aaKnown RBP17.54■□□□□ 0.4
UBXN4-202ENST00000415164 ACOX3O15254 700 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 ARHGEF9O43307 516 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 SMPD2O60906 423 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 SMIM24O75264 130 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 CBX7O95931 251 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 TSPAN8P19075 237 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 KRT20P35900 424 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 DUSP2Q05923 314 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 MGAT2Q10469 447 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 MAP4K2Q12851 820 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 SNTA1Q13424 505 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 SHEQ5VZ18 495 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 FAM219BQ5XKK7 198 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 ZDHHC24Q6UX98 284 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 CHMP1BQ7LBR1 199 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 PLCZ1Q86YW0 608 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 UBQLNLQ8IYU4 475 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 OR4F6Q8NGB9 312 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 SELENOMQ8WWX9 145 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 COL21A1Q96P44 957 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 GPR78Q96P69 363 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 HBEGFQ99075 208 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 UBTD1Q9HAC8 227 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 PRODH2Q9UF12 536 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 FBXL2Q9UKC9 423 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 PCTPQ9UKL6 214 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 ABCA2Q9BZC7 2435 aa17.54■□□□□ 0.4
UBXN4-202ENST00000415164 HMX2A2RU54 273 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 NME6O75414 186 aaPredicted RBP17.53■□□□□ 0.4
UBXN4-202ENST00000415164 PDYNP01213 254 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 ALDOAP04075 364 aaKnown RBP17.53■□□□□ 0.4
UBXN4-202ENST00000415164 ATP1B1P05026 303 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 IL12BP29460 328 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 SIRPAP78324 504 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 TRAF3Q13114 568 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 GAB1Q13480 694 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 SCIMPQ6UWF3 145 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 KRTAP1-3Q8IUG1 177 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 SMPDL3BQ92485 455 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 ZNF592Q92610 1267 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 PIK3IP1Q96FE7 263 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 ADOQ96SZ5 270 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 FAIM2Q9BWQ8 316 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 ANKRA2Q9H9E1 313 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 GRPEL1Q9HAV7 217 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 KLHL28Q9NXS3 571 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 CLCF1Q9UBD9 225 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 XPR1Q9UBH6 696 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 CES1P1Q9UKY3 287 aa17.53■□□□□ 0.4
UBXN4-202ENST00000415164 MED12Q93074 2177 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 A0A1B0GTL3 188 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 ESYT3A0FGR9 886 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 FRG2CA6NGY1 282 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 RBP1P09455 135 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 SRD5A2P31213 254 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 PHBP35232 272 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 KCNJ5P48544 419 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 LHX2P50458 406 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 HMGCS1Q01581 520 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 FAM27E3Q08E93 113 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 METTL2BQ6P1Q9 378 aaKnown RBP17.52■□□□□ 0.4
UBXN4-202ENST00000415164 TMEM81Q6P7N7 255 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 C1orf52Q8N6N3 182 aaKnown RBP17.52■□□□□ 0.4
UBXN4-202ENST00000415164 OR4K17Q8NGC6 315 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 NUDT8Q8WV74 236 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 TM4SF18Q96CE8 201 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 DTNBP1Q96EV8 351 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 G6PC3Q9BUM1 346 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 NTMT1Q9BV86 223 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 ZBTB26Q9HCK0 441 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 UTS2RQ9UKP6 389 aa17.52■□□□□ 0.4
UBXN4-202ENST00000415164 PYCARDQ9ULZ3 195 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms