RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 PITPNM3Q9BZ71 974 aa4.23□□□□□ -1.73
PTPRK-210ENST00000415055 NUAK2Q9H093 628 aa4.23□□□□□ -1.73
PTPRK-210ENST00000415055 NDST4Q9H3R1 872 aa4.23□□□□□ -1.73
PTPRK-210ENST00000415055 WDR54Q9H977 334 aa4.23□□□□□ -1.73
PTPRK-210ENST00000415055 UGT1A7Q9HAW7 530 aa4.23□□□□□ -1.73
PTPRK-210ENST00000415055 UGT1A10Q9HAW8 530 aa4.23□□□□□ -1.73
PTPRK-210ENST00000415055 UGT1A8Q9HAW9 530 aa4.23□□□□□ -1.73
PTPRK-210ENST00000415055 Q9N2J8 555 aa4.23□□□□□ -1.73
PTPRK-210ENST00000415055 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.23□□□□□ -1.73
PTPRK-210ENST00000415055 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.23□□□□□ -1.73
PTPRK-210ENST00000415055 ANKRD10Q9NXR5 420 aa4.23□□□□□ -1.73
PTPRK-210ENST00000415055 PSD3Q9NYI0 1048 aa4.23□□□□□ -1.73
PTPRK-210ENST00000415055 TAB2Q9NYJ8 693 aa4.23□□□□□ -1.73
PTPRK-210ENST00000415055 IL17CQ9P0M4 197 aa4.23□□□□□ -1.73
PTPRK-210ENST00000415055 UPB1Q9UBR1 384 aa4.23□□□□□ -1.73
PTPRK-210ENST00000415055 PLCL2Q9UPR0 1127 aa4.23□□□□□ -1.73
PTPRK-210ENST00000415055 RNF6Q9Y252 685 aa4.23□□□□□ -1.73
PTPRK-210ENST00000415055 TDRKHQ9Y2W6 561 aaKnown RBP4.23□□□□□ -1.73
PTPRK-210ENST00000415055 FAM169AQ9Y6X4 670 aa4.23□□□□□ -1.73
PTPRK-210ENST00000415055 NINQ8N4C6 2090 aa4.23□□□□□ -1.73
PTPRK-210ENST00000415055 NOTCH1P46531 2555 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 A0A0J9YY10 115 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 IDSB3KWA1 339 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 ADAM10O14672 748 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 TFECO14948 347 aaPredicted RBP4.22□□□□□ -1.73
PTPRK-210ENST00000415055 ARHGEF9O43307 516 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 BUD23O43709 281 aaKnown RBP4.22□□□□□ -1.73
PTPRK-210ENST00000415055 MFSD11O43934 449 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 SLC25A12O75746 678 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 ESRRBO95718 433 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 HSPA4LO95757 839 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 RAF1P04049 648 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 HEXBP07686 556 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 CHRM5P08912 532 aaPredicted RBP4.22□□□□□ -1.73
PTPRK-210ENST00000415055 PCNAP12004 261 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 FCGR2AP12318 317 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 UGT2B7P16662 529 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 ZNF24P17028 368 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 TNNT3P45378 269 aaPredicted RBP4.22□□□□□ -1.73
PTPRK-210ENST00000415055 VPS41P49754 854 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 EMP2P54851 167 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 GSCP56915 257 aaPredicted RBP4.22□□□□□ -1.73
PTPRK-210ENST00000415055 KRTAP10-11P60412 298 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 POLR2FP61218 127 aaKnown RBP4.22□□□□□ -1.73
PTPRK-210ENST00000415055 OC90Q02509 493 aaPredicted RBP4.22□□□□□ -1.73
PTPRK-210ENST00000415055 PMPCAQ10713 525 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 IRF3Q14653 427 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 DEFB113Q30KQ7 82 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 PCGF3Q3KNV8 242 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 FAM153CQ494X1 144 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 C9orf152Q5JTZ5 239 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 FAM182AQ5T1J6 154 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 UBAP2Q5T6F2 1119 aaKnown RBP4.22□□□□□ -1.73
PTPRK-210ENST00000415055 GPRC6AQ5T6X5 926 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 ZNF449Q6P9G9 518 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 PAMR1Q6UXH9 720 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 RANBP10Q6VN20 620 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 NAPRTQ6XQN6 538 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 C16orf47Q6ZP98 133 aaPredicted RBP4.22□□□□□ -1.73
PTPRK-210ENST00000415055 COX15Q7KZN9 410 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 SLC29A4Q7RTT9 530 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 GALNTL5Q7Z4T8 443 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 CDC20BQ86Y33 519 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 RFX6Q8HWS3 928 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 PHC2Q8IXK0 858 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 TEX26Q8N6G2 289 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 TTC29Q8NA56 475 aaPredicted RBP4.22□□□□□ -1.73
PTPRK-210ENST00000415055 POGLUT1Q8NBL1 392 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 TMEM178AQ8NBL3 297 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 OR52E1Q8NGJ3 308 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 OR2L2Q8NH16 312 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 ARRDC2Q8TBH0 407 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 PSMF1Q92530 271 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 SLC22A18Q96BI1 424 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 SAT2Q96F10 170 aaPredicted RBP4.22□□□□□ -1.73
PTPRK-210ENST00000415055 DCUN1D1Q96GG9 259 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 TMEM68Q96MH6 324 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 CSPG4P5Q96PW8 444 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 RAB3IPQ96QF0 476 aaPredicted RBP4.22□□□□□ -1.73
PTPRK-210ENST00000415055 VPS35Q96QK1 796 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 CCM2Q9BSQ5 444 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 GATA5Q9BWX5 397 aaPredicted RBP4.22□□□□□ -1.73
PTPRK-210ENST00000415055 TRIM7Q9C029 511 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 MAGEE1Q9HCI5 957 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 SNTG1Q9NSN8 517 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 CUTCQ9NTM9 273 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 PARVAQ9NVD7 372 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 EURLQ9NYK6 297 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 CPSF2Q9P2I0 782 aaKnown RBP4.22□□□□□ -1.73
PTPRK-210ENST00000415055 RWDD2AQ9UIY3 292 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 GNPTGQ9UJJ9 305 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 ADAM21Q9UKJ8 722 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 EXO1Q9UQ84 846 aaKnown RBP4.22□□□□□ -1.73
PTPRK-210ENST00000415055 KLHL20Q9Y2M5 609 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 ATP6V1DQ9Y5K8 247 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 CAPN7Q9Y6W3 813 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 PKD1L1Q8TDX9 2849 aa4.22□□□□□ -1.73
PTPRK-210ENST00000415055 MED12Q93074 2177 aa4.21□□□□□ -1.73
PTPRK-210ENST00000415055 GLYATL1P3A0A0U1RQE8 302 aa4.21□□□□□ -1.74
PTPRK-210ENST00000415055 A0A1B0GTH9 108 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms