RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 QPCTLQ9NXS2 382 aa10.29□□□□□ -0.76
RFFL-204ENST00000414419 TAS2R7Q9NYW3 318 aa10.29□□□□□ -0.76
RFFL-204ENST00000414419 COQ3Q9NZJ6 369 aa10.29□□□□□ -0.76
RFFL-204ENST00000414419 CCL27Q9Y4X3 112 aa10.29□□□□□ -0.76
RFFL-204ENST00000414419 NUP214P35658 2090 aaPredicted RBP10.29□□□□□ -0.76
RFFL-204ENST00000414419 ARHGAP21Q5T5U3 1957 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 WDR91A4D1P6 747 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 FIGNL2A6NMB9 653 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 TMEM114B3SHH9 223 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 TMEM233B4DJY2 109 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 AQP7O14520 342 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 PIP5K1BO14986 540 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 LSM1O15116 133 aaKnown RBP10.28□□□□□ -0.76
RFFL-204ENST00000414419 TM9SF1O15321 606 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 PDPK1O15530 556 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 ABCB7O75027 752 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 TRAPPC6AO75865 159 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 HSPA4LO95757 839 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 CELA3AP09093 270 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 RFPL3SP0C7P2 107 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 TACR1P25103 407 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 IL12BP29460 328 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 GPC1P35052 558 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 CASP3P42574 277 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 ASMTP46597 345 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 SERPINB4P48594 390 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 ADORA2A-AS1P86434 159 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 ZNF155Q12901 538 aaPredicted RBP10.28□□□□□ -0.76
RFFL-204ENST00000414419 DUSP8Q13202 625 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 ZNHIT3Q15649 155 aaPredicted RBP10.28□□□□□ -0.76
RFFL-204ENST00000414419 GXYLT1Q4G148 440 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 RFTN2Q52LD8 501 aaPredicted RBP10.28□□□□□ -0.76
RFFL-204ENST00000414419 WLSQ5T9L3 541 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 BICRALQ6AI39 1079 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 SP5Q6BEB4 398 aaPredicted RBP10.28□□□□□ -0.76
RFFL-204ENST00000414419 SLC30A6Q6NXT4 461 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 ZNF585AQ6P3V2 769 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 TMEM107Q6UX40 140 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 EXOC3L1Q86VI1 746 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 OR7G2Q8NG99 324 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 OR2T11Q8NH01 316 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 ZFP28Q8NHY6 868 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 TMBIM1Q969X1 311 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 PPCDCQ96CD2 204 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 TMCO6Q96DC7 493 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 EGLN2Q96KS0 407 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 PPP3R2Q96LZ3 170 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 AMDHD1Q96NU7 426 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 TSSK3Q96PN8 268 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 ANGPTL4Q9BY76 406 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 TUBB1Q9H4B7 451 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 REEP4Q9H6H4 257 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 RUBCNLQ9H714 662 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 ZNF703Q9H7S9 590 aaPredicted RBP10.28□□□□□ -0.76
RFFL-204ENST00000414419 FOLH1BQ9HBA9 442 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 PROK2Q9HC23 129 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 CHST11Q9NPF2 352 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 DDX18Q9NVP1 670 aaKnown RBP10.28□□□□□ -0.76
RFFL-204ENST00000414419 KLRF1Q9NZS2 232 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 SH3BP4Q9P0V3 963 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 GPR55Q9Y2T6 319 aaPredicted RBP10.28□□□□□ -0.76
RFFL-204ENST00000414419 OR10H1Q9Y4A9 318 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 KLF2Q9Y5W3 355 aaPredicted RBP10.28□□□□□ -0.76
RFFL-204ENST00000414419 LIPGQ9Y5X9 500 aa10.28□□□□□ -0.76
RFFL-204ENST00000414419 CENPEQ02224 2701 aa10.27□□□□□ -0.76
RFFL-204ENST00000414419 A0A087WV62 115 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 A0A1B0GVC2 190 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 LRRC3CA6NJW4 275 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 CYSRT1A8MQ03 144 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 TO15178 435 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 BIRC5O15392 142 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 AKAP10O43572 662 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 PEX11AO75192 247 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 TRIM3O75382 744 aaPredicted RBP10.27□□□□□ -0.77
RFFL-204ENST00000414419 SKAP2O75563 359 aaPredicted RBP10.27□□□□□ -0.77
RFFL-204ENST00000414419 ZWINTO95229 277 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 CLDN14O95500 239 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 SDC1P18827 310 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 ELAVL4P26378 380 aaKnown RBP10.27□□□□□ -0.77
RFFL-204ENST00000414419 HTR1EP28566 365 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 SOX18P35713 384 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 DCTP40126 519 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 MC3RP41968 323 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 ETV4P43268 484 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 MRPS22P82650 360 aaKnown RBP10.27□□□□□ -0.77
RFFL-204ENST00000414419 SNTA1Q13424 505 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 EFR3AQ14156 821 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 UGT3A2Q3SY77 523 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 ATP6AP1LQ52LC2 224 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 ZNF787Q6DD87 383 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 NCCRP1Q6ZVX7 275 aaPredicted RBP10.27□□□□□ -0.77
RFFL-204ENST00000414419 R3HCC1LQ7Z5L2 792 aaKnown RBP10.27□□□□□ -0.77
RFFL-204ENST00000414419 SLC44A2Q8IWA5 706 aaPredicted RBP10.27□□□□□ -0.77
RFFL-204ENST00000414419 OR5M9Q8NGP3 310 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 OR1J4Q8NGS1 313 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 CLHC1Q8NHS4 586 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 CA5BP1Q8WTZ4 195 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 RND1Q92730 232 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 ZBTB9Q96C00 473 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 SDCCAG3Q96C92 435 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms