RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 PRRG3Q9BZD7 231 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 C6orf106Q9H6K1 298 aaPredicted RBP12.74□□□□□ -0.37
LIMS1-205ENST00000410093 LMAN1LQ9HAT1 526 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 HRASLS2Q9NWW9 162 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 SATB2Q9UPW6 733 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 CA5BQ9Y2D0 317 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 NINQ8N4C6 2090 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 TRBV4-1A0A0J9YWV2 114 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 IRGMA1A4Y4 181 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 OR5K3A6NET4 321 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 SNTNA6NMZ2 147 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 PROB1E7EW31 1015 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 CNOT3O75175 753 aaKnown RBP12.73□□□□□ -0.37
LIMS1-205ENST00000410093 ATP1B1P05026 303 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 THBS1P07996 1170 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 CHRM4P08173 479 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 THEGLP0DJG4 465 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 CPMP14384 443 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 MC3RP41968 323 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 OCA2Q04671 838 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 ST3GAL3Q11203 375 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 EIF2B5Q13144 721 aaKnown RBP12.73□□□□□ -0.37
LIMS1-205ENST00000410093 CTF1Q16619 201 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 DGUOKQ16854 277 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 ARHGAP11BQ3KRB8 267 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 ZNF311Q5JNZ3 666 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 MFSD12Q6NUT3 480 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 C1orf94Q6P1W5 598 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 CASP12Q6UXS9 341 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 PTCHD4Q6ZW05 846 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 TAF8Q7Z7C8 310 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 SLC22A18ASQ8N1D0 253 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 STX19Q8N4C7 294 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 OR8J1Q8NGP2 316 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 OR9A2Q8NGT5 310 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 OR10G6Q8NH81 332 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 ZNF675Q8TD23 568 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 S100ZQ8WXG8 99 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 SGCDQ92629 289 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 UCN3Q969E3 161 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 SLC38A4Q969I6 547 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 GTPBP3Q969Y2 492 aaKnown RBP12.73□□□□□ -0.37
LIMS1-205ENST00000410093 CLDN23Q96B33 292 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 GIMAP5Q96F15 307 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 STACQ99469 402 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 IER2Q9BTL4 223 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 SEMA6CQ9H3T2 930 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 KRCC1Q9NPI7 259 aaPredicted RBP12.73□□□□□ -0.37
LIMS1-205ENST00000410093 POLE3Q9NRF9 147 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 ZNF226Q9NYT6 803 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 FBXO4Q9UKT5 387 aa12.73□□□□□ -0.37
LIMS1-205ENST00000410093 C19orf53Q9UNZ5 99 aaPredicted RBP12.73□□□□□ -0.37
LIMS1-205ENST00000410093 ARHGEF17Q96PE2 2063 aaPredicted RBP12.73□□□□□ -0.37
LIMS1-205ENST00000410093 A0A0J9YVX5 310 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 SHISA7A6NL88 538 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 H0YGG7 62 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 PLOD3O60568 738 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 SRPX2O60687 465 aaPredicted RBP12.72□□□□□ -0.37
LIMS1-205ENST00000410093 CTSVO60911 334 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 NME6O75414 186 aaPredicted RBP12.72□□□□□ -0.37
LIMS1-205ENST00000410093 SP9P0CG40 484 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 PSMB9P28065 219 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 ALDH4A1P30038 563 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 ARF3P61204 181 aaPredicted RBP12.72□□□□□ -0.37
LIMS1-205ENST00000410093 CSTF1Q05048 431 aaKnown RBP12.72□□□□□ -0.37
LIMS1-205ENST00000410093 FZD2Q14332 565 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 LARS2Q15031 903 aaKnown RBP12.72□□□□□ -0.37
LIMS1-205ENST00000410093 TRAM2Q15035 370 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 TCEA2Q15560 299 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 OCLNQ16625 522 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 ZSWIM7Q19AV6 140 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 TIMM50Q3ZCQ8 353 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 ENTPD8Q5MY95 495 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 C12orf73Q69YU5 71 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 LAIR1Q6GTX8 287 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 PGBD2Q6P3X8 592 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 ZNF367Q7RTV3 350 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 PEX5LQ8IYB4 626 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 C7orf57Q8NEG2 295 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 VANGL1Q8TAA9 524 aaPredicted RBP12.72□□□□□ -0.37
LIMS1-205ENST00000410093 TBC1D15Q8TC07 691 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 SLC37A2Q8TED4 501 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 KLHL6Q8WZ60 621 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 GGHQ92820 318 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 OTUB1Q96FW1 271 aaPredicted RBP12.72□□□□□ -0.37
LIMS1-205ENST00000410093 VMP1Q96GC9 406 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 MACROD1Q9BQ69 325 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 TEX12Q9BXU0 123 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.72□□□□□ -0.37
LIMS1-205ENST00000410093 NAA50Q9GZZ1 169 aaKnown RBP12.72□□□□□ -0.37
LIMS1-205ENST00000410093 SLC38A1Q9H2H9 487 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 PIGUQ9H490 435 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 ARMC7Q9H6L4 198 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 DUSP22Q9NRW4 184 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 TBC1D23Q9NUY8 699 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 REV1Q9UBZ9 1251 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 KLHL20Q9Y2M5 609 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 WASHC1A8K0Z3 465 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 M0R3G1 203 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms