RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 XAGE5Q8WWM1 108 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 JPH3Q8WXH2 748 aaPredicted RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 RAB8BQ92930 207 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 TMIGD2Q96BF3 282 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 ELP4Q96EB1 424 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 C10orf90Q96M02 699 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 TRNT1Q96Q11 434 aaKnown RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 TM9SF2Q99805 663 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 BCL7BQ9BQE9 202 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 ORAI3Q9BRQ5 295 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 SERHL2Q9H4I8 314 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 DUSP21Q9H596 190 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 LMAN1LQ9HAT1 526 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 HRASLS2Q9NWW9 162 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 KCMF1Q9P0J7 381 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 PTGFRNQ9P2B2 879 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 TRPC4Q9UBN4 977 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 ACAD8Q9UKU7 415 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 KLHL20Q9Y2M5 609 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 SLC22A7Q9Y694 548 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 ARHGEF17Q96PE2 2063 aaPredicted RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 TRBV23OR9-2A0A075B6M9 112 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 IGHV1OR15-9A0A0B4J2B8 117 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 A0A0J9YVX5 310 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 PRAMEF25A6NGN4 478 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 TRIM64BA6NI03 449 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 GLOD5A6NK44 160 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 ENO4A6NNW6 628 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 FAAHO00519 579 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 CTSVO60911 334 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 WISP1O95388 367 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 SLC5A2P31639 672 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 GGT2P36268 569 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 POLR2IP36954 125 aaKnown RBP7.03□□□□□ -1.28
CXCR4-202ENST00000409817 YAP1P46937 504 aaKnown RBP7.03□□□□□ -1.28
CXCR4-202ENST00000409817 FASLGP48023 281 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 LIM2P55344 173 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 SLC35A2P78381 396 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 TFF2Q03403 129 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 PMS2P3Q13401 168 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 PUM1Q14671 1186 aaKnown RBP eCLIP7.03□□□□□ -1.28
CXCR4-202ENST00000409817 LASP1Q14847 261 aaKnown RBP7.03□□□□□ -1.28
CXCR4-202ENST00000409817 TMEM201Q5SNT2 666 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 ZNF787Q6DD87 383 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 LAIR2Q6ISS4 152 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 SZRD1Q7Z422 152 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 CLVS1Q8IUQ0 354 aaPredicted RBP7.03□□□□□ -1.28
CXCR4-202ENST00000409817 SLC44A2Q8IWA5 706 aaPredicted RBP7.03□□□□□ -1.28
CXCR4-202ENST00000409817 SLC5A8Q8N695 610 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 NUP43Q8NFH3 380 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 GPR32P1Q8NGA4 272 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 ISOC1Q96CN7 298 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 COL21A1Q96P44 957 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 MS4A4EQ96PG1 132 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 ALPK1Q96QP1 1244 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 MACROD1Q9BQ69 325 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 PINK1Q9BXM7 581 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 ACTRT3Q9BYD9 372 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 SEMA6CQ9H3T2 930 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 PLCXD1Q9NUJ7 323 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 WNT16Q9UBV4 365 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 MGAT4BQ9UQ53 548 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 HIF3AQ9Y2N7 669 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 SNX11Q9Y5W9 270 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 LAMA3Q16787 3333 aa7.03□□□□□ -1.28
CXCR4-202ENST00000409817 RANBP2P49792 3224 aaKnown RBP7.02□□□□□ -1.28
CXCR4-202ENST00000409817 A0A087WV62 115 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 A0A1W2PRQ8 180 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 PRAMEF27A3QJZ7 478 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 BLACEA4D250 179 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 H0YGG7 62 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 CSF2P04141 144 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 H1F0P07305 194 aaKnown RBP7.02□□□□□ -1.28
CXCR4-202ENST00000409817 CYP4B1P13584 511 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 NME1P15531 152 aaKnown RBP7.02□□□□□ -1.28
CXCR4-202ENST00000409817 TNFRSF1BP20333 461 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 CBLP22681 906 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 CD38P28907 300 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 IFNA8P32881 189 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 FEN1P39748 380 aaKnown RBP7.02□□□□□ -1.28
CXCR4-202ENST00000409817 STARD6P59095 220 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 ARF3P61204 181 aaPredicted RBP7.02□□□□□ -1.28
CXCR4-202ENST00000409817 DGCR6Q14129 220 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 GPR19Q15760 415 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 NEDD8Q15843 81 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 SYPL1Q16563 259 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 NDUFA9Q16795 377 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 LEXMQ3ZCV2 418 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 DCST1Q5T197 706 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 CWF19L1Q69YN2 538 aaKnown RBP7.02□□□□□ -1.28
CXCR4-202ENST00000409817 XAF1Q6GPH4 301 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 TCTN3Q6NUS6 607 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 ZCCHC12Q6PEW1 402 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 TMEM107Q6UX40 140 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 C6orf15Q6UXA7 325 aaPredicted RBP7.02□□□□□ -1.28
CXCR4-202ENST00000409817 B3GNT8Q7Z7M8 397 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 TRIM73Q86UV7 250 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 GKN2Q86XP6 184 aa7.02□□□□□ -1.28
CXCR4-202ENST00000409817 P3H2Q8IVL5 708 aa7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms