RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 TRIM77I1YAP6 450 aa14.58□□□□□ -0.07
LIMS2-205ENST00000409455 SERPINI2O75830 405 aa14.58□□□□□ -0.07
LIMS2-205ENST00000409455 ACP2P11117 423 aa14.58□□□□□ -0.07
LIMS2-205ENST00000409455 ZNF8P17098 575 aaPredicted RBP14.58□□□□□ -0.07
LIMS2-205ENST00000409455 RPL3P39023 403 aaKnown RBP14.58□□□□□ -0.07
LIMS2-205ENST00000409455 CTSOP43234 321 aaPredicted RBP14.58□□□□□ -0.07
LIMS2-205ENST00000409455 RAB14P61106 215 aa14.58□□□□□ -0.07
LIMS2-205ENST00000409455 CLLU1Q5K131 121 aa14.58□□□□□ -0.07
LIMS2-205ENST00000409455 PLEKHS1Q5SXH7 462 aa14.58□□□□□ -0.07
LIMS2-205ENST00000409455 ASTLQ6HA08 431 aaPredicted RBP14.58□□□□□ -0.07
LIMS2-205ENST00000409455 UNC5DQ6UXZ4 953 aa14.58□□□□□ -0.07
LIMS2-205ENST00000409455 ADGRF3Q8IZF5 1079 aa14.58□□□□□ -0.07
LIMS2-205ENST00000409455 ZFP41Q8N8Y5 198 aa14.58□□□□□ -0.07
LIMS2-205ENST00000409455 APOBEC4Q8WW27 367 aaKnown RBP14.58□□□□□ -0.07
LIMS2-205ENST00000409455 IRF7Q92985 503 aa14.58□□□□□ -0.07
LIMS2-205ENST00000409455 HEXA-AS1Q9H8Q6 139 aa14.58□□□□□ -0.07
LIMS2-205ENST00000409455 UBQLN2Q9UHD9 624 aa14.58□□□□□ -0.07
LIMS2-205ENST00000409455 TRANK1O15050 2925 aa14.58□□□□□ -0.08
LIMS2-205ENST00000409455 TSPAN4O14817 238 aa14.58□□□□□ -0.08
LIMS2-205ENST00000409455 NME6O75414 186 aaPredicted RBP14.58□□□□□ -0.08
LIMS2-205ENST00000409455 DDCP20711 480 aa14.58□□□□□ -0.08
LIMS2-205ENST00000409455 GKP32189 559 aa14.58□□□□□ -0.08
LIMS2-205ENST00000409455 RPS13P62277 151 aaKnown RBP14.58□□□□□ -0.08
LIMS2-205ENST00000409455 ZNF77Q15935 545 aa14.58□□□□□ -0.08
LIMS2-205ENST00000409455 RPS26P11Q5JNZ5 115 aaPredicted RBP14.58□□□□□ -0.08
LIMS2-205ENST00000409455 TCTN3Q6NUS6 607 aa14.58□□□□□ -0.08
LIMS2-205ENST00000409455 ASB18Q6ZVZ8 466 aa14.58□□□□□ -0.08
LIMS2-205ENST00000409455 OR11H7Q8NGC8 314 aa14.58□□□□□ -0.08
LIMS2-205ENST00000409455 RNFT2Q96EX2 444 aa14.58□□□□□ -0.08
LIMS2-205ENST00000409455 SENP5Q96HI0 755 aaPredicted RBP14.58□□□□□ -0.08
LIMS2-205ENST00000409455 BRD9Q9H8M2 597 aa14.58□□□□□ -0.08
LIMS2-205ENST00000409455 EXTL2Q9UBQ6 330 aa14.58□□□□□ -0.08
LIMS2-205ENST00000409455 DPP7Q9UHL4 492 aa14.58□□□□□ -0.08
LIMS2-205ENST00000409455 EXOSC1Q9Y3B2 195 aaKnown RBP14.58□□□□□ -0.08
LIMS2-205ENST00000409455 WNT6Q9Y6F9 365 aa14.58□□□□□ -0.08
LIMS2-205ENST00000409455 ZNF197O14709 1029 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 ZNF821O75541 412 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-205ENST00000409455 GBAP04062 536 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 HLA-DPB1P04440 258 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 FURINP09958 794 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 IL32P24001 234 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 CCT3P49368 545 aaKnown RBP14.57□□□□□ -0.08
LIMS2-205ENST00000409455 SMIM11AP58511 58 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 HSF2Q03933 536 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 NAE1Q13564 534 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 EXOSC2Q13868 293 aaKnown RBP14.57□□□□□ -0.08
LIMS2-205ENST00000409455 DSG2Q14126 1118 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 GINS1Q14691 196 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 PLA1AQ53H76 456 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 LY6G5CQ5SRR4 150 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 BRAT1Q6PJG6 821 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 MARCH9Q86YJ5 346 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 SMG7Q92540 1137 aaKnown RBP14.57□□□□□ -0.08
LIMS2-205ENST00000409455 OTUB1Q96FW1 271 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-205ENST00000409455 LRRC3BQ96PB8 259 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 TMED9Q9BVK6 235 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 DPCDQ9BVM2 203 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-205ENST00000409455 ABCG5Q9H222 651 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 CLCA2Q9UQC9 943 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 NPIPB15A6NHN6 443 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-205ENST00000409455 AKAP8O43823 692 aaKnown RBP14.57□□□□□ -0.08
LIMS2-205ENST00000409455 SOCS5O75159 536 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 BCHEP06276 602 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 TYRP14679 529 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 ZNF81P51508 661 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 MC1RQ01726 317 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 SEMG2Q02383 582 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 RFT1Q96AA3 541 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 CHFRQ96EP1 664 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 SORCS2Q96PQ0 1159 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 ARHGAP9Q9BRR9 750 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 PRR14Q9BWN1 585 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 PBX4Q9BYU1 374 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 PPA2Q9H2U2 334 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 TBC1D17Q9HA65 648 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 FGF20Q9NP95 211 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-205ENST00000409455 SPHK2Q9NRA0 654 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 NUDT15Q9NV35 164 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 CUEDC1Q9NWM3 386 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-205ENST00000409455 UCKL1Q9NWZ5 548 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 NINQ8N4C6 2090 aa14.57□□□□□ -0.08
LIMS2-205ENST00000409455 TRAV6A0A075B6T7 132 aa14.56□□□□□ -0.08
LIMS2-205ENST00000409455 RPS10-NUDT3A0A1W2PQS6 291 aa14.56□□□□□ -0.08
LIMS2-205ENST00000409455 A0A1W2PRB8 838 aa14.56□□□□□ -0.08
LIMS2-205ENST00000409455 C7orf66A4D0T2 115 aa14.56□□□□□ -0.08
LIMS2-205ENST00000409455 GTPBP1O00178 669 aaKnown RBP14.56□□□□□ -0.08
LIMS2-205ENST00000409455 KPNA5O15131 536 aa14.56□□□□□ -0.08
LIMS2-205ENST00000409455 PRODHO43272 600 aa14.56□□□□□ -0.08
LIMS2-205ENST00000409455 MAPK8P45983 427 aa14.56□□□□□ -0.08
LIMS2-205ENST00000409455 SRP54P61011 504 aaKnown RBP14.56□□□□□ -0.08
LIMS2-205ENST00000409455 C2orf80Q0P641 193 aa14.56□□□□□ -0.08
LIMS2-205ENST00000409455 COMMD6Q7Z4G1 85 aa14.56□□□□□ -0.08
LIMS2-205ENST00000409455 PRSS42Q7Z5A4 293 aa14.56□□□□□ -0.08
LIMS2-205ENST00000409455 OR11H4Q8NGC9 324 aa14.56□□□□□ -0.08
LIMS2-205ENST00000409455 SLC7A13Q8TCU3 470 aa14.56□□□□□ -0.08
LIMS2-205ENST00000409455 SCMH1Q96GD3 660 aa14.56□□□□□ -0.08
LIMS2-205ENST00000409455 NLNQ9BYT8 704 aa14.56□□□□□ -0.08
LIMS2-205ENST00000409455 MBD1Q9UIS9 605 aaPredicted RBP14.56□□□□□ -0.08
LIMS2-205ENST00000409455 IGLV3-16A0A075B6K0 115 aa14.56□□□□□ -0.08
LIMS2-205ENST00000409455 A8MUA0 341 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms