RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 CALHM2Q9HA72 323 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 C1orf123Q9NWV4 160 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 PAK5Q9P286 719 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 ATXN10Q9UBB4 475 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 CHRNA9Q9UGM1 479 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 BLOC1S6Q9UL45 172 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 ZNF490Q9ULM2 529 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 SPATA2Q9UM82 520 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 PARD3Q8TEW0 1356 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 A0A087WZY1 265 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 LRIT2A6NDA9 550 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 CCT8L1PA6NM43 557 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 WASHC1A8K0Z3 465 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 WASH3PC4AMC7 463 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 SDHDO14521 159 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 BUB1O43683 1085 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 CRLF1O75462 422 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 TSPY4P0CV99 314 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 TSPY10P0CW01 314 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 GP9P14770 177 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 MT3P25713 68 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 CYLC1P35663 651 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 MDH1P40925 334 aaKnown RBP3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 MFAP2P55001 183 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 MRPS6P82932 125 aaKnown RBP3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 ZP4Q12836 540 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 COX10Q12887 443 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 OVGP1Q12889 678 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 SCGB2A2Q13296 93 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 ABRAXAS2Q15018 415 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 FCN2Q15485 313 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 GLIPR1L2Q4G1C9 344 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 TMEM52BQ4KMG9 183 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 DMKNQ6E0U4 476 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 ARMCX5Q6P1M9 558 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 AFTPHQ6ULP2 937 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 ATRAIDQ6UW56 229 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 ARSKQ6UWY0 536 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 ZNF562Q6V9R5 426 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 WASH2PQ6VEQ5 465 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 TSEN54Q7Z6J9 526 aaKnown RBP3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 LHFPL4Q7Z7J7 247 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 SLC25A42Q86VD7 318 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 SLC47A2Q86VL8 602 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 GRAMD2AQ8IUY3 354 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 CCDC36Q8IYA8 594 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 U2AF1L4Q8WU68 220 aaKnown RBP3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 SLC25A36Q96CQ1 311 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 NTNG2Q96CW9 530 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 POLE3Q9NRF9 147 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 SLC35D1Q9NTN3 355 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 DCAF13Q9NV06 445 aaKnown RBP3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 UTP6Q9NYH9 597 aaKnown RBP3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 RDH8Q9NYR8 311 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 ARMCX1Q9P291 453 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 MBD2Q9UBB5 411 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 GHRLQ9UBU3 117 aa3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 PURGQ9UJV8 347 aaKnown RBP3.11□□□□□ -1.91
HMGB1P17-201ENST00000403495 NCAPD2Q15021 1401 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 SYNJ2O15056 1496 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 TTC26A0AVF1 554 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 TRABD2BA6NFA1 517 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 SRRM5B3KS81 715 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 CASKO14936 926 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 PEX11AO75192 247 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 OR4F21O95013 312 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 NDUFA7O95182 113 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 MT-ND1P03886 318 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 HOXD4P09016 255 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 KRT13P13646 458 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 IDSP22304 550 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 PPP2R1BP30154 601 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 PRELPP51888 382 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 HERVK_113P63132 956 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 ERVK-8P63133 956 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 ELP6Q0PNE2 266 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 BNIP1Q12981 228 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 PDZK1IP1Q13113 114 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 TFDP1Q14186 410 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 CRMP1Q14194 572 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 CD226Q15762 336 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 C14orf28Q4W4Y0 310 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 NHLRC3Q5JS37 347 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 ASPHD2Q6ICH7 369 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 ABRAXAS1Q6UWZ7 409 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 HACD2Q6Y1H2 254 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 PAQR9Q6ZVX9 377 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 RANBP3LQ86VV4 465 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 ZNF573Q86YE8 665 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 EFCAB13Q8IY85 973 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 NFAM1Q8NET5 270 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 OR6T1Q8NGN1 323 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 ITLN1Q8WWA0 313 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 DLX4Q92988 240 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 ART4Q93070 314 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 SYAP1Q96A49 352 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 ADIPOR1Q96A54 375 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 DTNBP1Q96EV8 351 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 DNAJA3Q96EY1 480 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 DHTKD1Q96HY7 919 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms