RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 GRHL2Q6ISB3 625 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PLCZ1Q86YW0 608 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 C7orf57Q8NEG2 295 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 FNDC9Q8TBE3 224 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 NEUROG1Q92886 237 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 EXT2Q93063 718 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ZNF845Q96IR2 970 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 SFXN2Q96NB2 322 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 KLHL4Q9C0H6 718 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 RHOJQ9H4E5 214 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CNOT10Q9H9A5 744 aaKnown RBP10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 POPDC3Q9HBV1 291 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ELOVL5Q9NYP7 299 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CD274Q9NZQ7 290 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 KLRF1Q9NZS2 232 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CES1P1Q9UKY3 287 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 LAMP3Q9UQV4 416 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 TRRAPQ9Y4A5 3859 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 EMC8O43402 210 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 AQP8O94778 261 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 IGHV4-39P01824 125 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 DANCRP0C864 163 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CD8BP10966 210 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 TBXA2RP21731 343 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CDKN1AP38936 164 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PIK3CBP42338 1070 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 XKP51811 444 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 NEK2P51955 445 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 RAP1GDS1P52306 607 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 NRG3P56975 720 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 EEF1A1P68104 462 aaKnown RBP10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 RPP38P78345 283 aaKnown RBP10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ZNF844Q08AG5 666 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 SNTA1Q13424 505 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PRICKLE4Q2TBC4 344 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 BEX5Q5H9J7 111 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 EEF1A1P5Q5VTE0 462 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 STAC2Q6ZMT1 411 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ZNF662Q6ZS27 426 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 LRRC70Q7Z2Q7 622 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 P4HA3Q7Z4N8 544 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ATG4DQ86TL0 474 aaPredicted RBP10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 GAS2L3Q86XJ1 694 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 UBQLNLQ8IYU4 475 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 OR7G1Q8NGA0 311 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 AKAP1Q92667 903 aaKnown RBP eCLIP10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PLPPR2Q96GM1 343 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 UBXN10Q96LJ8 280 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 RTN4RQ9BZR6 473 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 SLCO5A1Q9H2Y9 848 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CXorf56Q9H5V9 222 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ANKRA2Q9H9E1 313 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 RNF122Q9H9V4 155 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 LYARQ9NX58 379 aaKnown RBP10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 MAT2BQ9NZL9 334 aa10.69□□□□□ -0.7
SPTLC1P3-201ENST00000403408 UBXN8O00124 270 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 TLX2O43763 284 aaPredicted RBP10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ADAM11O75078 769 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CDH16O75309 829 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 IFNA2P01563 188 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 MTHFD2P13995 350 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CPMP14384 443 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 EPB42P16452 691 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 NT5EP21589 574 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 SLC6A8P48029 635 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 KCNJ5P48544 419 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PIK3CGP48736 1102 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 FNTAP49354 379 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 EMDP50402 254 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CLDN20P56880 219 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PLCXD2Q0VAA5 305 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 LTB4RQ15722 352 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ZKSCAN8Q15776 578 aaPredicted RBP10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 BCL2A1Q16548 175 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 EXOC3L2Q2M3D2 409 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 TRMT12Q53H54 448 aaKnown RBP10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 OR52E8Q6IFG1 317 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 FAM180BQ6P0A1 224 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ISCA2Q86U28 154 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ADCY4Q8NFM4 1077 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 OR5M1Q8NGP8 315 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 WDR20Q8TBZ3 569 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 UBTD2Q8WUN7 234 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CAVIN3Q969G5 261 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 UBE2E3Q969T4 207 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 TMBIM1Q969X1 311 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 LCORQ96JN0 433 aaPredicted RBP10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ATOH8Q96SQ7 321 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 SLC39A3Q9BRY0 314 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ALG9Q9H6U8 611 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PSD3Q9NYI0 1048 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PLLPQ9Y342 182 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 MRPS18CQ9Y3D5 142 aaKnown RBP10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ZNF337Q9Y3M9 751 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 TSC22D4Q9Y3Q8 395 aa10.68□□□□□ -0.7
SPTLC1P3-201ENST00000403408 K7EPI3 171 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 TO15178 435 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 TSPAN2O60636 221 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CD8AP01732 235 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 KRT15P19012 456 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms