RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 CD3GP09693 182 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 CCL5P13501 91 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 AOC1P19801 751 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 HNF1AP20823 631 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 FPR1P21462 350 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 DDX6P26196 483 aaKnown RBP eCLIP5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 FHITP49789 147 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 RAB11AP62491 216 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 SULT2A1Q06520 285 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 FOXM1Q08050 763 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 PPP1R8Q12972 351 aaKnown RBP5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 RAB11BQ15907 218 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 SSX2Q16385 188 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 AP5B1Q2VPB7 878 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 TBRG1Q3YBR2 411 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 PCID2Q5JVF3 399 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 HECTD2Q5U5R9 776 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 TMEM211Q6ICI0 200 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 ZNF425Q6IV72 752 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 C1orf94Q6P1W5 598 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 BMP8AQ7Z5Y6 402 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 CLEC14AQ86T13 490 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 PLCZ1Q86YW0 608 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 ARHGAP24Q8N264 748 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 BCORP1Q8N888 145 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 RAB40AQ8WXH6 277 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 FAM46BQ96A09 425 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 NTAN1Q96AB6 310 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 DOCK6Q96HP0 2047 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 GPR78Q96P69 363 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 WDR41Q9HAD4 459 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 YAE1D1Q9NRH1 226 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 RGS18Q9NS28 235 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 MRPL39Q9NYK5 338 aaKnown RBP5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 SNX7Q9UNH6 387 aa5.85□□□□□ -1.47
TRAPPC13-202ENST00000399438 SF3B1O75533 1304 aaKnown RBP eCLIP5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 CCDC162PA2VCL2 907 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 H0YJX3 145 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 CDC7O00311 574 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 SH3BGRLO75368 114 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 GOT2P00505 430 aaKnown RBP5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 GFAPP14136 432 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 PCMT1P22061 227 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 MAGEB1P43366 347 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 MVDP53602 400 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 NRG3P56975 720 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 PRPS1P60891 318 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 FUT7Q11130 342 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 MADCAM1Q13477 382 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 GRB7Q14451 532 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 ZNF235Q14590 738 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 TRMT5Q32P41 509 aaKnown RBP5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 CCDC153Q494R4 210 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 VPS26BQ4G0F5 336 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 NET1Q7Z628 596 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 SATL1Q86VE3 508 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 FAM58AQ8N1B3 248 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 MAB21L3Q8N8X9 362 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 HMGCLL1Q8TB92 370 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 METTL2AQ96IZ6 378 aaKnown RBP5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 PLEKHA8Q96JA3 519 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 FOXB1Q99853 325 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 MRPL13Q9BYD1 178 aaKnown RBP5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 NLNQ9BYT8 704 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 ATG10Q9H0Y0 220 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 C12orf4Q9NQ89 552 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 POFUT2Q9Y2G5 429 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 SCN10AQ9Y5Y9 1956 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 PRR19A6NJB7 356 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 MAGEB17A8MXT2 336 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 H7C1Q1 480 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 SDHDO14521 159 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 CTDSPLO15194 276 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 GPC4O75487 556 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 MT-ND2P03891 347 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 NCK1P16333 377 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 THBS2P35442 1172 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 GNG10P50151 68 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 RAP1GDS1P52306 607 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 CTXN1P60606 82 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 ACTBP60709 375 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 ACTA2P62736 377 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 ACTG1P63261 375 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 ACTG2P63267 376 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 ACTC1P68032 377 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 ACTA1P68133 377 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 CDKL1Q00532 357 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 BDH1Q02338 343 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 VEZF1Q14119 521 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 OR4D1Q15615 310 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 USP41Q3LFD5 358 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 POM121L1PQ3SYA9 428 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 MTX3Q5HYI7 312 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 IL23RQ5VWK5 629 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 ZNF549Q6P9A3 640 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 ACAD11Q709F0 780 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 TMEM86AQ8N2M4 240 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 AMER3Q8N944 861 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 OR4K2Q8NGD2 314 aa5.84□□□□□ -1.47
TRAPPC13-202ENST00000399438 OR10Q1Q8NGQ4 319 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms