RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 ZNF234Q14588 700 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 LASP1Q14847 261 aaKnown RBP24.05■■□□□ 1.44
COL13A1-203ENST00000398969 FAM78AQ5JUQ0 283 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 SLC9A6Q92581 669 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 C1GALT1C1Q96EU7 318 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 SAP130Q9H0E3 1048 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 GPR52Q9Y2T5 361 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 TRANK1O15050 2925 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 A8MV72 311 aaPredicted RBP24.05■■□□□ 1.44
COL13A1-203ENST00000398969 TFECO14948 347 aaPredicted RBP24.05■■□□□ 1.44
COL13A1-203ENST00000398969 CASC3O15234 703 aaKnown RBP24.05■■□□□ 1.44
COL13A1-203ENST00000398969 SLC35G4P0C7Q5 338 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 RPS5P46782 204 aaKnown RBP24.05■■□□□ 1.44
COL13A1-203ENST00000398969 ZFP69Q49AA0 526 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 DDI2Q5TDH0 399 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 SLC27A4Q6P1M0 643 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 TMEM64Q6YI46 380 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 PRR23CQ6ZRP0 262 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 QSOX2Q6ZRP7 698 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 MRGPREQ86SM8 312 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 GDPD1Q8N9F7 314 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 SYT14Q8NB59 555 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 TEX47Q8TBZ9 253 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 KATNB1Q9BVA0 655 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 FAIM2Q9BWQ8 316 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 KLHL31Q9H511 634 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 SNX7Q9UNH6 387 aa24.05■■□□□ 1.44
COL13A1-203ENST00000398969 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.05■■□□□ 1.44
COL13A1-203ENST00000398969 A0A087WUU8 490 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 IRGMA1A4Y4 181 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 FAM172BPA6NC97 362 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 HMX3A6NHT5 357 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 HMGN2P05204 90 aaKnown RBP24.04■■□□□ 1.44
COL13A1-203ENST00000398969 ALPPL2P10696 532 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 DAB2P98082 770 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 SLAMF1Q13291 335 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 OR8D4Q8NGM9 314 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 ZFYVE19Q96K21 471 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 PINK1Q9BXM7 581 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 QRSL1Q9H0R6 528 aaKnown RBP24.04■■□□□ 1.44
COL13A1-203ENST00000398969 TMEM245Q9H330 911 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 ISYNA1Q9NPH2 558 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 ATG2AQ2TAZ0 1938 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 A0A0G2JPF8 293 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 SMIM30A4D0T7 59 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 HNRNPCL2B2RXH8 293 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 HNRNPCL3B7ZW38 293 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 SEC14L5O43304 696 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 TMCC2O75069 709 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 ERAL1O75616 437 aaKnown RBP24.04■■□□□ 1.44
COL13A1-203ENST00000398969 STATHP02808 62 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 HNRNPCL4P0DMR1 293 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 MINDY4Q4G0A6 757 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 CRTC2Q53ET0 693 aaPredicted RBP24.04■■□□□ 1.44
COL13A1-203ENST00000398969 PDZK1Q5T2W1 519 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 KIAA1161Q6NSJ0 714 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 ASB16Q96NS5 453 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 TM9SF2Q99805 663 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 PRR14Q9BWN1 585 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 C11orf54Q9H0W9 315 aaPredicted RBP24.04■■□□□ 1.44
COL13A1-203ENST00000398969 SFXN1Q9H9B4 322 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 TOR4AQ9NXH8 423 aa24.04■■□□□ 1.44
COL13A1-203ENST00000398969 DENND4AQ7Z401 1863 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 OTOL1A6NHN0 477 aaPredicted RBP24.03■■□□□ 1.44
COL13A1-203ENST00000398969 SNTNA6NMZ2 147 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 SLC30A4O14863 429 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 UBXN7O94888 489 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 TRAPPC2P0DI81 140 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 TRAPPC2BP0DI82 140 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 MTNR1AP48039 350 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 ANXA11P50995 505 aaKnown RBP24.03■■□□□ 1.44
COL13A1-203ENST00000398969 GNA13Q14344 377 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 TBRG1Q3YBR2 411 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 GPAT3Q53EU6 434 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 SFXN5Q8TD22 340 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 UFD1Q92890 307 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 DEC1Q9P2X7 70 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 KCNE3Q9Y6H6 103 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 C2orf16Q68DN1 1984 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 HEATR5BQ9P2D3 2071 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 POLR1CO15160 346 aaPredicted RBP24.03■■□□□ 1.44
COL13A1-203ENST00000398969 FHP07954 510 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 PRDX1Q06830 199 aaKnown RBP24.03■■□□□ 1.44
COL13A1-203ENST00000398969 GAB4Q2WGN9 574 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 ZNF750Q32MQ0 723 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 ANKK1Q8NFD2 765 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 GNPDA2Q8TDQ7 276 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 FGF13Q92913 245 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 DMRTB1Q96MA1 342 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 FERD3LQ96RJ6 166 aa24.03■■□□□ 1.44
COL13A1-203ENST00000398969 EXOSC1Q9Y3B2 195 aaKnown RBP24.03■■□□□ 1.44
COL13A1-203ENST00000398969 C4orf51C9J302 202 aa24.02■■□□□ 1.44
COL13A1-203ENST00000398969 PGRMC2O15173 223 aa24.02■■□□□ 1.44
COL13A1-203ENST00000398969 LIMS3P0CW19 117 aa24.02■■□□□ 1.44
COL13A1-203ENST00000398969 LIMS4P0CW20 117 aa24.02■■□□□ 1.44
COL13A1-203ENST00000398969 TAS2R41P59536 307 aa24.02■■□□□ 1.44
COL13A1-203ENST00000398969 FABP5Q01469 135 aa24.02■■□□□ 1.44
COL13A1-203ENST00000398969 DUSP2Q05923 314 aa24.02■■□□□ 1.44
COL13A1-203ENST00000398969 SLC9A5Q14940 896 aa24.02■■□□□ 1.44
COL13A1-203ENST00000398969 BHLHB9Q6PI77 547 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms