RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SOCS2O14508 198 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 KLF4O43474 513 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 MAN1A2O60476 641 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 CLPXO76031 633 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 HMGN2P05204 90 aaKnown RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 IGHV4-34P06331 123 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 CD247P20963 164 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 PIGAP37287 484 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 ACY1Q03154 408 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF141Q15928 474 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 PEAR1Q5VY43 1037 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 FIGLAQ6QHK4 219 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 UBE3DQ7Z6J8 389 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 OR52N1Q8NH53 320 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 ABHD8Q96I13 439 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 CLDND1Q9NY35 253 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 WARS2Q9UGM6 360 aaKnown RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 UTS2RQ9UKP6 389 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 CLDN25C9JDP6 229 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 CHST10O43529 356 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 UBL4AP11441 157 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 CRATP43155 626 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF45Q02386 682 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 SF3A3Q12874 501 aaKnown RBP eCLIP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 ELAVL1Q15717 326 aaKnown RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 C1QTNF12Q5T7M4 302 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 RRM2BQ7LG56 351 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF551Q7Z340 670 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 KLHL6Q8WZ60 621 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 NMD3Q96D46 503 aaKnown RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 HSPBAP1Q96EW2 488 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 UNKQ9C0B0 810 aaKnown RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 CLN6Q9NWW5 311 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 KIF17Q9P2E2 1029 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 ERGIC3Q9Y282 383 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 PCDHGB2Q9Y5G2 931 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 PEX16Q9Y5Y5 336 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 FREM3P0C091 2139 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 IGKV1-8A0A0C4DH67 115 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 IMPA2O14732 288 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 AKAP8O43823 692 aaKnown RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 PRKYO43930 277 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 TPST1O60507 370 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 MYCP01106 439 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 PEPDP12955 493 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 NKG7Q16617 165 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 FAM182AQ5T1J6 154 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 C12orf73Q69YU5 71 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 PLAG1Q6DJT9 500 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 CHST15Q7LFX5 561 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 LNX2Q8N448 690 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 GPR156Q8NFN8 814 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 OR4K5Q8NGD3 323 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 FBXO30Q8TB52 745 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 TTC9Q92623 222 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 KIAA1143Q96AT1 154 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 ZBTB9Q96C00 473 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 HBEGFQ99075 208 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 IL1RL2Q9HB29 575 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 LTB4R2Q9NPC1 389 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 RAB23Q9ULC3 237 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 THADAQ6YHU6 1953 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 A0A1B0GTW7 788 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 OR6B1O95007 311 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 GADD45GO95257 159 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 SNAP29O95721 258 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 BCL10O95999 233 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 KLK1P06870 262 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 MAGP20916 626 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 NXPH1P58417 271 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 GPR107Q5VW38 600 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 KCTD20Q7Z5Y7 419 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 CDK20Q8IZL9 346 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 STX19Q8N4C7 294 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 CEP76Q8TAP6 659 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 PIGXQ8TBF5 258 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 ZFYVE19Q96K21 471 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 MED18Q9BUE0 208 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 TGIF2Q9GZN2 237 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 OSGEPL1Q9H4B0 414 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 PIF1Q9H611 641 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 Q9N2J8 555 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 PDE7BQ9NP56 450 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 ENPP5Q9UJA9 477 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 KLHL20Q9Y2M5 609 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 PCDHGB7Q9Y5F8 929 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 PCNX1Q96RV3 2341 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 A0A1W2PQD3 144 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 CDHR4A6H8M9 788 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 EIF4E2O60573 245 aaKnown RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 PNMTP11086 282 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 SLC5A2P31639 672 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 DUSP3P51452 185 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 AFF3P51826 1226 aaKnown RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 RPP38P78345 283 aaKnown RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 SPDYE7PQ495Y7 208 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 EMC4Q5J8M3 183 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 RTL4Q6ZR62 310 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 P2RY8Q86VZ1 359 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 SYS1Q8N2H4 156 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms