RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 EEF1A2Q05639 463 aaKnown RBP7.77□□□□□ -1.17
PTPRD-204ENST00000397606 CYP27C1Q4G0S4 372 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 SLC30A6Q6NXT4 461 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 PAPD4Q6PIY7 484 aaKnown RBP7.77□□□□□ -1.17
PTPRD-204ENST00000397606 NT5CQ8TCD5 201 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 CREB3L4Q8TEY5 395 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 TM9SF4Q92544 642 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 CDS1Q92903 461 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 GLIPR2Q9H4G4 154 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 UCKL1Q9NWZ5 548 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 KNTC1P50748 2209 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 ACOT7O00154 380 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 SNX4O95219 450 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 CELA2BP08218 269 aaPredicted RBP7.77□□□□□ -1.17
PTPRD-204ENST00000397606 NR1H2P55055 460 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 EIF3IQ13347 325 aaKnown RBP7.77□□□□□ -1.17
PTPRD-204ENST00000397606 SFT2D3Q587I9 215 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 C16orf87Q6PH81 154 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 P4HA3Q7Z4N8 544 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 RETREG3Q86VR2 466 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 SLC34A3Q8N130 599 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 LINC01555Q8NAE3 123 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 OR7G1Q8NGA0 311 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 NETO1Q8TDF5 533 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 GNPDA2Q8TDQ7 276 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 RDH12Q96NR8 316 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 SLC46A1Q96NT5 459 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 PINK1Q9BXM7 581 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 KCMF1Q9P0J7 381 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 SLC35A3Q9Y2D2 325 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.77□□□□□ -1.17
PTPRD-204ENST00000397606 FBP2O00757 339 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 RGS10O43665 173 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 HCN1O60741 890 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 ALOX12BO75342 701 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 FESP07332 822 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 ZNF3P17036 446 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 PRPH2P23942 346 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 ACVR2AP27037 513 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 SLC6A6P31641 620 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 PTGER1P34995 402 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 NOVA1P51513 510 aaKnown RBP7.77□□□□□ -1.17
PTPRD-204ENST00000397606 PSPHP78330 225 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 DNM1P34Q6PK57 102 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 ISLR2Q6UXK2 745 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 HMGN2P46Q86SG4 172 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 FBXO27Q8NI29 283 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 OSTF1Q92882 214 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 CLDN23Q96B33 292 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 FER1L6-AS2Q96M78 137 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 CPPED1Q9BRF8 314 aaPredicted RBP7.77□□□□□ -1.17
PTPRD-204ENST00000397606 ENPP4Q9Y6X5 453 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 VSTM2BA6NLU5 285 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 OXSR1O95747 527 aaPredicted RBP7.76□□□□□ -1.17
PTPRD-204ENST00000397606 B3GALT4O96024 378 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 MYF5P13349 255 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 ELAVL1Q15717 326 aaKnown RBP7.76□□□□□ -1.17
PTPRD-204ENST00000397606 CLEC12AQ5QGZ9 265 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 CES4AQ5XG92 561 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 SPAG17Q6Q759 2223 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 FAM111BQ6SJ93 734 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 WDR34Q96EX3 536 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 SMAD5Q99717 465 aaKnown RBP7.76□□□□□ -1.17
PTPRD-204ENST00000397606 MRPS26Q9BYN8 205 aaKnown RBP7.76□□□□□ -1.17
PTPRD-204ENST00000397606 KAT8Q9H7Z6 458 aaKnown RBP7.76□□□□□ -1.17
PTPRD-204ENST00000397606 GORASP2Q9H8Y8 452 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 UBQLN4Q9NRR5 601 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 CABIN1Q9Y6J0 2220 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 CCDC187A0A096LP49 1063 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 A0A1W2PR48 441 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 TMPRSS11DO60235 418 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 ABCB7O75027 752 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 ARAFP10398 606 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 BMP1P13497 986 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 ZNF823P16415 610 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 HOXC12P31275 282 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 RAPSNQ13702 412 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 CCNIQ14094 377 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 RPL13AP3Q6NVV1 102 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 FUNDC1Q8IVP5 155 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 SLITRK4Q8IW52 837 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 OR5T3Q8NGG3 340 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 NEURL3Q96EH8 262 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 TRNT1Q96Q11 434 aaKnown RBP7.76□□□□□ -1.17
PTPRD-204ENST00000397606 ADOQ96SZ5 270 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 OR10A5Q9H207 317 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 OR51V1Q9H2C8 321 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 TIGARQ9NQ88 270 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 DCAF13Q9NV06 445 aaKnown RBP7.76□□□□□ -1.17
PTPRD-204ENST00000397606 RPL36Q9Y3U8 105 aaKnown RBP7.76□□□□□ -1.17
PTPRD-204ENST00000397606 PCDHGB7Q9Y5F8 929 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 TANC1Q9C0D5 1861 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 TRAPPC13A5PLN9 417 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 NPIPA5E9PKD4 350 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 PGRMC2O15173 223 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 TOX3O15405 576 aaPredicted RBP7.76□□□□□ -1.17
PTPRD-204ENST00000397606 KCNK5O95279 499 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 BSGP35613 385 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 RANBP1P43487 201 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 ELOAQ14241 798 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms