RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 CT45A8P0DMV1 189 aa16.71■□□□□ 0.27
FXN-203ENST00000396366 CT45A9P0DMV2 189 aa16.71■□□□□ 0.27
FXN-203ENST00000396366 GABRA1P14867 456 aa16.71■□□□□ 0.27
FXN-203ENST00000396366 BMP7P18075 431 aa16.71■□□□□ 0.27
FXN-203ENST00000396366 ELAVL4P26378 380 aaKnown RBP16.71■□□□□ 0.27
FXN-203ENST00000396366 CRHR1P34998 444 aa16.71■□□□□ 0.27
FXN-203ENST00000396366 DLX5P56178 289 aa16.71■□□□□ 0.27
FXN-203ENST00000396366 RPP38P78345 283 aaKnown RBP16.71■□□□□ 0.27
FXN-203ENST00000396366 C2orf80Q0P641 193 aa16.71■□□□□ 0.27
FXN-203ENST00000396366 SNTB1Q13884 538 aaKnown RBP16.71■□□□□ 0.27
FXN-203ENST00000396366 HEPACAMQ14CZ8 416 aa16.71■□□□□ 0.27
FXN-203ENST00000396366 CT45A2Q5DJT8 189 aa16.71■□□□□ 0.27
FXN-203ENST00000396366 FRMD7Q6ZUT3 714 aa16.71■□□□□ 0.27
FXN-203ENST00000396366 YRDCQ86U90 279 aaKnown RBP16.71■□□□□ 0.27
FXN-203ENST00000396366 DMRTC2Q8IXT2 367 aaPredicted RBP16.71■□□□□ 0.27
FXN-203ENST00000396366 NAXEQ8NCW5 288 aa16.71■□□□□ 0.27
FXN-203ENST00000396366 TNIP2Q8NFZ5 429 aa16.71■□□□□ 0.27
FXN-203ENST00000396366 OR7G2Q8NG99 324 aa16.71■□□□□ 0.27
FXN-203ENST00000396366 OR1J4Q8NGS1 313 aa16.71■□□□□ 0.27
FXN-203ENST00000396366 ZNF675Q8TD23 568 aa16.71■□□□□ 0.27
FXN-203ENST00000396366 MCCC2Q9HCC0 563 aa16.71■□□□□ 0.27
FXN-203ENST00000396366 ITGB1BP2Q9UKP3 347 aa16.71■□□□□ 0.27
FXN-203ENST00000396366 GRID1Q9ULK0 1009 aa16.71■□□□□ 0.27
FXN-203ENST00000396366 CCDC168Q8NDH2 2452 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 CCDC151A5D8V7 595 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 FRG2CA6NGY1 282 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 TO15178 435 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 ACOX3O15254 700 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 REM1O75628 298 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 HOXD4P09016 255 aaPredicted RBP16.7■□□□□ 0.26
FXN-203ENST00000396366 CPA3P15088 417 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 KRT4P19013 534 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 CCT5P48643 541 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 DCAF7P61962 342 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 CEBPEQ15744 281 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 CCDC153Q494R4 210 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 RIPPLY2Q5TAB7 128 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 VASNQ6EMK4 673 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 NPSR1Q6W5P4 371 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 WDR53Q7Z5U6 358 aaPredicted RBP16.7■□□□□ 0.26
FXN-203ENST00000396366 TDRPQ86YL5 185 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 C4orf33Q8N1A6 199 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 EIF1ADQ8N9N8 165 aaKnown RBP16.7■□□□□ 0.26
FXN-203ENST00000396366 WDSUB1Q8N9V3 476 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 FAM83FQ8NEG4 500 aaPredicted RBP16.7■□□□□ 0.26
FXN-203ENST00000396366 OR4N2Q8NGD1 307 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 CCDC126Q96EE4 140 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 UGT2B28Q9BY64 529 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 SERHLQ9NQF3 203 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 OXSMQ9NWU1 459 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 SIRT5Q9NXA8 310 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 KLRF1Q9NZS2 232 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 MAPRE3Q9UPY8 281 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 EXO1Q9UQ84 846 aaKnown RBP16.7■□□□□ 0.26
FXN-203ENST00000396366 POLR3HQ9Y535 204 aaPredicted RBP16.7■□□□□ 0.26
FXN-203ENST00000396366 PCDHGB3Q9Y5G1 929 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 PTGDR2Q9Y5Y4 395 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 CELSR1Q9NYQ6 3014 aa16.7■□□□□ 0.26
FXN-203ENST00000396366 AHRRA9YTQ3 701 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 MYO1GB0I1T2 1018 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 COPEO14579 308 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 POU3F2P20265 443 aaPredicted RBP16.69■□□□□ 0.26
FXN-203ENST00000396366 DDCP20711 480 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 DNAJB13P59910 316 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 ACSF3Q4G176 576 aaPredicted RBP16.69■□□□□ 0.26
FXN-203ENST00000396366 CFAP157Q5JU67 520 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 CLEC6AQ6EIG7 209 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 FAM71E1Q6IPT2 247 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 SLC30A6Q6NXT4 461 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 TRIM46Q7Z4K8 759 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 CCDC63Q8NA47 563 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 OR2W6PQ8NHA6 318 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.69■□□□□ 0.26
FXN-203ENST00000396366 RDH11Q8TC12 318 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 WDYHV1Q96HA8 205 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 VSTM2LQ96N03 204 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 COL21A1Q96P44 957 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 BTBD9Q96Q07 612 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 BBS4Q96RK4 519 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 ADOQ96SZ5 270 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 OSBPL11Q9BXB4 747 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 L2HGDHQ9H9P8 463 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 FOLH1BQ9HBA9 442 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 CAMK2AQ9UQM7 478 aa16.69■□□□□ 0.26
FXN-203ENST00000396366 ANKRD17O75179 2603 aaKnown RBP16.69■□□□□ 0.26
FXN-203ENST00000396366 PRAMEF25A6NGN4 478 aa16.68■□□□□ 0.26
FXN-203ENST00000396366 C17orf51A8MQB3 221 aa16.68■□□□□ 0.26
FXN-203ENST00000396366 SNPHO15079 494 aa16.68■□□□□ 0.26
FXN-203ENST00000396366 TSPAN2O60636 221 aa16.68■□□□□ 0.26
FXN-203ENST00000396366 ERN1O75460 977 aaKnown RBP16.68■□□□□ 0.26
FXN-203ENST00000396366 CRCPO75575 148 aa16.68■□□□□ 0.26
FXN-203ENST00000396366 EPPINO95925 133 aa16.68■□□□□ 0.26
FXN-203ENST00000396366 JUNP05412 331 aaKnown RBP16.68■□□□□ 0.26
FXN-203ENST00000396366 ZNF763Q0D2J5 394 aa16.68■□□□□ 0.26
FXN-203ENST00000396366 IMPG1Q17R60 797 aa16.68■□□□□ 0.26
FXN-203ENST00000396366 TMEM81Q6P7N7 255 aa16.68■□□□□ 0.26
FXN-203ENST00000396366 C10orf107Q8IVU9 208 aa16.68■□□□□ 0.26
FXN-203ENST00000396366 FAM9CQ8IZT9 166 aa16.68■□□□□ 0.26
FXN-203ENST00000396366 ABTB1Q969K4 478 aaPredicted RBP16.68■□□□□ 0.26
FXN-203ENST00000396366 EGLN2Q96KS0 407 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms