RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ZNF619Q8N2I2 560 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 CBARPQ8N350 705 aaPredicted RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 GPR137CQ8N3F9 429 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 HDHD5Q9BXW7 423 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 CPEB1Q9BZB8 566 aaKnown RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 KLHL42Q9P2K6 505 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 CLEC4EQ9ULY5 219 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF860A6NHJ4 632 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 FMO6PO60774 539 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 PRLP01236 227 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 F7P08709 466 aaPredicted RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 MZT1Q08AG7 82 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 VEZF1Q14119 521 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 FAM46AQ96IP4 442 aaKnown RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 RDH14Q9HBH5 336 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 FBRSL1Q9HCM7 1045 aaKnown RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 CREBZFQ9NS37 354 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 FTSJ1Q9UET6 329 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 SLC35A3Q9Y2D2 325 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 OR1A2Q9Y585 309 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ETFAP13804 333 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ART1P52961 327 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 GLO1Q04760 184 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 LAPTM4AQ15012 233 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 OR4D1Q15615 310 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 SPATC1Q76KD6 591 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 COMMD6Q7Z4G1 85 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ZFYVE21Q9BQ24 234 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 DNTTIP1Q9H147 329 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 MTG2Q9H4K7 406 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF226Q9NYT6 803 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 SPEF1Q9Y4P9 236 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 DNAJC15Q9Y5T4 150 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 TMEM189-UBE2V1I3L0A0 370 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 AURKAO14965 403 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ADAP00813 363 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 IFNA5P01569 189 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 OSMP13725 252 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 RBMS1P29558 406 aaKnown RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 LRP8Q14114 963 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 KIR2DS3Q14952 304 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ARL14Q8N4G2 192 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 CCDC71LQ8N9Z2 235 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 C16orf78Q8WTQ4 265 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 F2RL3Q96RI0 385 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 TREX2Q9BQ50 279 aaPredicted RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 EIF5A2Q9GZV4 153 aaKnown RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF696Q9H7X3 374 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 SRA1Q9HD15 236 aaKnown RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 HIF3AQ9Y2N7 669 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 IGKV6-21A0A0C4DH24 114 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 PCP4L1A6NKN8 68 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 CENPBD1B2RD01 187 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 RAB3BP20337 219 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 MYF6P23409 242 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ITGB7P26010 798 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 GPR4P46093 362 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 HTR3AP46098 478 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 PTPRRQ15256 657 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 RSU1Q15404 277 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 MRPL10Q7Z7H8 261 aaKnown RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 LIX1LQ8IVB5 337 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 MRPL41Q8IXM3 137 aaKnown RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 SYNPOQ8N3V7 929 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 METTL27Q8N6F8 245 aaPredicted RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 CNIH3Q8TBE1 160 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 SPRYD4Q8WW59 207 aaPredicted RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 SLC41A3Q96GZ6 507 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 KCNK13Q9HB14 408 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 FBXL3Q9UKT7 428 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 KCNS2Q9ULS6 477 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 CARD8Q9Y2G2 431 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 RNF215Q9Y6U7 377 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 TRAPPC13A5PLN9 417 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 CASC3O15234 703 aaKnown RBP5.18□□□□□ -1.58
VPS13C-204ENST00000395898 SCO2O43819 266 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 SOX2P48431 317 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 TLE3Q04726 772 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 TBRG1Q3YBR2 411 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 GDPGP1Q6ZNW5 385 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 TTLL10Q6ZVT0 673 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 TMEM25Q86YD3 366 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 MFSD8Q8NHS3 518 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 ZDHHC1Q8WTX9 485 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 TEPSINQ96N21 525 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 PHB2Q99623 299 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 SLC6A7Q99884 636 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 DNAJC25-GNG10A0A024R161 153 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 GRXCR2A6NFK2 248 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 INMT-MINDY4F8WBC2 141 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 FOXE1O00358 373 aaPredicted RBP5.18□□□□□ -1.58
VPS13C-204ENST00000395898 MAP2K3P46734 347 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 THAP3Q8WTV1 239 aaPredicted RBP5.18□□□□□ -1.58
VPS13C-204ENST00000395898 PEX11GQ96HA9 241 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 FBP2O00757 339 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 SLC16A8O95907 504 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 GGT1P19440 569 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 CAPN3P20807 821 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 PCGF2P35227 344 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 MAN2A2P49641 1150 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms