RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 PXYLP1Q8TE99 480 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 SETD7Q8WTS6 366 aaKnown RBP15.24■□□□□ 0.03
PCDH1-203ENST00000394536 SNX33Q8WV41 574 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 DTD2Q96FN9 168 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 COQ3Q9NZJ6 369 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 CACNA1IQ9P0X4 2223 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 HPGDP15428 266 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 RGS1Q08116 209 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 PGBD2Q6P3X8 592 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 TMEM150AQ86TG1 271 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 VRK2Q86Y07 508 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 HDDC3Q8N4P3 179 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 OR51L1Q8NGJ5 315 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 ARSGQ96EG1 525 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 SAMD8Q96LT4 415 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 CDCA4Q9BXL8 241 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 NCKAP1Q9Y2A7 1128 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 EXOSC1Q9Y3B2 195 aaKnown RBP15.24■□□□□ 0.03
PCDH1-203ENST00000394536 NEUROG3Q9Y4Z2 214 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 NOX1Q9Y5S8 564 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 RIIAD1A6NNX1 92 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 C12orf71A8MTZ7 269 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 FOXE1O00358 373 aaPredicted RBP15.23■□□□□ 0.03
PCDH1-203ENST00000394536 OR10H2O60403 315 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 HMGN1P05114 100 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 ASGR2P07307 311 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 ACADMP11310 421 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 CBLP22681 906 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 ACSL1P33121 698 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 CTBP2P56545 445 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 SSX1Q16384 188 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 BCL2L15Q5TBC7 163 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 OR4C11Q6IEV9 310 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 IL17RDQ8NFM7 739 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 OR52I1Q8NGK6 324 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 DDX31Q9H8H2 851 aaKnown RBP15.23■□□□□ 0.03
PCDH1-203ENST00000394536 MRPL15Q9P015 296 aaKnown RBP15.23■□□□□ 0.03
PCDH1-203ENST00000394536 EIF3KQ9UBQ5 218 aaKnown RBP15.23■□□□□ 0.03
PCDH1-203ENST00000394536 C1orf226A1L170 272 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 ANKRD34BA5PLL1 514 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 PRODHO43272 600 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 GMFGO60234 142 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 PYCR1P32322 319 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 MC3RP41968 323 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 TAS2R38P59533 333 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 KLHDC8AQ8IYD2 350 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 UBQLNLQ8IYU4 475 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 SRFBP1Q8NEF9 429 aaKnown RBP15.23■□□□□ 0.03
PCDH1-203ENST00000394536 OR6C4Q8NGE1 309 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 SETD6Q8TBK2 473 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 GNPDA2Q8TDQ7 276 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 ADAMTS19Q8TE59 1207 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 PCDHGB2Q9Y5G2 931 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 NYNRINQ9P2P1 1898 aaKnown RBP15.23■□□□□ 0.03
PCDH1-203ENST00000394536 FKTNO75072 461 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 ALAS2P22557 587 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 BLVRAP53004 296 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 ARTNQ5T4W7 220 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 Q6ZNB5 142 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 GET4Q7L5D6 327 aaPredicted RBP15.23■□□□□ 0.03
PCDH1-203ENST00000394536 ZER1Q7Z7L7 766 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 ELMOD2Q8IZ81 293 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 DNAJC5GQ8N7S2 189 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 OR6K6Q8NGW6 343 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 BBS10Q8TAM1 723 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 GAL3ST1Q99999 423 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 BRD7Q9NPI1 651 aa15.23■□□□□ 0.03
PCDH1-203ENST00000394536 A0A1W2PRG6 482 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 PRPH2P23942 346 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 SEC13P55735 322 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 PUM1Q14671 1186 aaKnown RBP eCLIP15.22■□□□□ 0.03
PCDH1-203ENST00000394536 PPP2R2DQ66LE6 453 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 IKBIPQ70UQ0 350 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 CEACAM19Q7Z692 300 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 TOMM5Q8N4H5 51 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 CPA6Q8N4T0 437 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 COX18Q8N8Q8 333 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 ZNF431Q8TF32 576 aaPredicted RBP15.22■□□□□ 0.03
PCDH1-203ENST00000394536 SPRYD4Q8WW59 207 aaPredicted RBP15.22■□□□□ 0.03
PCDH1-203ENST00000394536 OSTF1Q92882 214 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 TM4SF18Q96CE8 201 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 PAK6Q9NQU5 681 aaPredicted RBP15.22■□□□□ 0.03
PCDH1-203ENST00000394536 ZNF224Q9NZL3 707 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 BRCA1P38398 1863 aaKnown RBP15.22■□□□□ 0.03
PCDH1-203ENST00000394536 LOC105369274A0A096LPK9 316 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 PROM1O43490 865 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 HCN1O60741 890 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 ADRB3P13945 408 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 ATP12AP54707 1039 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 CHRNEQ04844 493 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 SYT14P1Q58G82 188 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 TCEAL5Q5H9L2 206 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 SLX4IPQ5VYV7 408 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 ERN2Q76MJ5 926 aaKnown RBP15.22■□□□□ 0.03
PCDH1-203ENST00000394536 DPPA4Q7L190 304 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 ZNF438Q7Z4V0 828 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 OR4N4Q8N0Y3 316 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 PCNPQ8WW12 178 aaKnown RBP15.22■□□□□ 0.03
PCDH1-203ENST00000394536 PDXPQ96GD0 296 aa15.22■□□□□ 0.03
PCDH1-203ENST00000394536 LMLNQ96KR4 655 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms