RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 MARC2Q969Z3 335 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 KCTD7Q96MP8 289 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 LYSMD1Q96S90 227 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 WRAP53Q9BUR4 548 aaKnown RBP10.52□□□□□ -0.73
CUX1-204ENST00000393824 GPR63Q9BZJ6 419 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 FOXQ1Q9C009 403 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 TPT1P8Q9HAU6 139 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 IL26Q9NPH9 171 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 THSD1Q9NS62 852 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 NDOR1Q9UHB4 597 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 MBD1Q9UIS9 605 aaPredicted RBP10.52□□□□□ -0.73
CUX1-204ENST00000393824 DIMT1Q9UNQ2 313 aaKnown RBP10.52□□□□□ -0.73
CUX1-204ENST00000393824 PCDHB11Q9Y5F2 797 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 RNF215Q9Y6U7 377 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 KNL1Q8NG31 2342 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 TRBV5-4A0A0C4DH59 114 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 LOC102723532A0A0G2JNH3 316 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 TSPAN11A1L157 253 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 ATG13O75143 517 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 PPM1BO75688 479 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 CPEP16870 476 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 PCGF2P35227 344 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 TNFRSF4P43489 277 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 EVX1P49640 407 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 TAS2R38P59533 333 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 SPIBQ01892 262 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 CNTN1Q12860 1018 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 FZD5Q13467 585 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 TMEM81Q6P7N7 255 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 CNIH2Q6PI25 160 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 ABI3BPQ7Z7G0 1075 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 PDZD3Q86UT5 571 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 SERPINA9Q86WD7 417 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 LRRC17Q8N6Y2 441 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 L3MBTL4Q8NA19 623 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 OR9Q2Q8NGE9 314 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 OR8J2Q8NGG1 315 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 OR8D1Q8WZ84 308 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 UCN3Q969E3 161 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 MTFMTQ96DP5 389 aaKnown RBP10.51□□□□□ -0.73
CUX1-204ENST00000393824 MTERF3Q96E29 417 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 GABRG3Q99928 467 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 B3GAT2Q9NPZ5 323 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 SNX11Q9Y5W9 270 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 KCNE1BA0A087WTH5 132 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 ARRDC5A6NEK1 342 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 UPK3BL1B0FP48 263 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 UPK3BL2E5RIL1 263 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 AGRPO00253 132 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 KHNYNO15037 678 aaKnown RBP10.51□□□□□ -0.73
CUX1-204ENST00000393824 LRATO95237 230 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 SLC25A14O95258 325 aaPredicted RBP10.51□□□□□ -0.73
CUX1-204ENST00000393824 PRAMEF1O95521 474 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 NUDT7P0C024 238 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 SLC6A1P30531 599 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 NTSR1P30989 418 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 P2RY2P41231 377 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 BLVRAP53004 296 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 DBPQ10586 325 aaPredicted RBP10.51□□□□□ -0.73
CUX1-204ENST00000393824 EXOSC2Q13868 293 aaKnown RBP10.51□□□□□ -0.73
CUX1-204ENST00000393824 P2RY14Q15391 338 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 FCN2Q15485 313 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 IFI44LQ53G44 452 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 C6orf132Q5T0Z8 1188 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 PIP5KL1Q5T9C9 394 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 C22orf42Q6IC83 251 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 Q6ZVL8 140 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 RBPMSQ93062 196 aaKnown RBP10.51□□□□□ -0.73
CUX1-204ENST00000393824 SECISBP2Q96T21 854 aaKnown RBP10.51□□□□□ -0.73
CUX1-204ENST00000393824 NELL2Q99435 816 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 PRR14Q9BWN1 585 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 ELOVL6Q9H5J4 265 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 ACER3Q9NUN7 267 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 UBQLN2Q9UHD9 624 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 GMEB2Q9UKD1 530 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 FZD4Q9ULV1 537 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 NCKAP1Q9Y2A7 1128 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 DSPPQ9NZW4 1301 aa10.51□□□□□ -0.73
CUX1-204ENST00000393824 NUP214P35658 2090 aaPredicted RBP10.5□□□□□ -0.73
CUX1-204ENST00000393824 SDK1Q7Z5N4 2213 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 A0A0A6YYJ9 748 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 C7orf66A4D0T2 115 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 TUBAL3A6NHL2 446 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 ADRB3P13945 408 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 HOXB2P14652 356 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 AMD1P17707 334 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 MMP12P39900 470 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 AGFG1P52594 562 aaKnown RBP10.5□□□□□ -0.73
CUX1-204ENST00000393824 GPR85P60893 370 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 MLF2Q15773 248 aaPredicted RBP10.5□□□□□ -0.73
CUX1-204ENST00000393824 UGT8Q16880 541 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 PLK5Q496M5 336 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 USP45Q70EL2 814 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 TMIEQ8NEW7 156 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 OR7G3Q8NG95 312 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 OR11H4Q8NGC9 324 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 HGDQ93099 445 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 RADILQ96JH8 1075 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.5□□□□□ -0.73
CUX1-204ENST00000393824 MED28Q9H204 178 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms