RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 ARMC8Q8IUR7 673 aa14□□□□□ -0.17
MKS1-202ENST00000393119 C1orf210Q8IVY1 113 aa14□□□□□ -0.17
MKS1-202ENST00000393119 NLGN4XQ8N0W4 816 aa14□□□□□ -0.17
MKS1-202ENST00000393119 CHPT1Q8WUD6 406 aa14□□□□□ -0.17
MKS1-202ENST00000393119 CCDC74AQ96AQ1 378 aa14□□□□□ -0.17
MKS1-202ENST00000393119 LYRM4Q9HD34 91 aa14□□□□□ -0.17
MKS1-202ENST00000393119 P2RX2Q9UBL9 471 aa14□□□□□ -0.17
MKS1-202ENST00000393119 SEC14L3Q9UDX4 400 aa14□□□□□ -0.17
MKS1-202ENST00000393119 TNFRSF11BO00300 401 aa14□□□□□ -0.17
MKS1-202ENST00000393119 DUSP8Q13202 625 aa14□□□□□ -0.17
MKS1-202ENST00000393119 BCL2A1Q16548 175 aa14□□□□□ -0.17
MKS1-202ENST00000393119 DUSP5Q16690 384 aa14□□□□□ -0.17
MKS1-202ENST00000393119 MEP1AQ16819 746 aa14□□□□□ -0.17
MKS1-202ENST00000393119 ZNF628Q5EBL2 1059 aa14□□□□□ -0.17
MKS1-202ENST00000393119 PERM1Q5SV97 790 aa14□□□□□ -0.17
MKS1-202ENST00000393119 TMEM64Q6YI46 380 aa14□□□□□ -0.17
MKS1-202ENST00000393119 DEF8Q6ZN54 512 aa14□□□□□ -0.17
MKS1-202ENST00000393119 USP51Q70EK9 711 aa14□□□□□ -0.17
MKS1-202ENST00000393119 MEX3DQ86XN8 651 aaKnown RBP14□□□□□ -0.17
MKS1-202ENST00000393119 SVOPLQ8N434 492 aa14□□□□□ -0.17
MKS1-202ENST00000393119 SLC5A8Q8N695 610 aa14□□□□□ -0.17
MKS1-202ENST00000393119 TANKQ92844 425 aa14□□□□□ -0.17
MKS1-202ENST00000393119 NIPSNAP1Q9BPW8 284 aa14□□□□□ -0.17
MKS1-202ENST00000393119 RBM4BQ9BQ04 359 aaKnown RBP14□□□□□ -0.17
MKS1-202ENST00000393119 RBM4Q9BWF3 364 aaKnown RBP14□□□□□ -0.17
MKS1-202ENST00000393119 ROGDIQ9GZN7 287 aa14□□□□□ -0.17
MKS1-202ENST00000393119 PDE7BQ9NP56 450 aa14□□□□□ -0.17
MKS1-202ENST00000393119 PALMDQ9NP74 551 aa14□□□□□ -0.17
MKS1-202ENST00000393119 TBC1D23Q9NUY8 699 aa14□□□□□ -0.17
MKS1-202ENST00000393119 CDC14AQ9UNH5 594 aa14□□□□□ -0.17
MKS1-202ENST00000393119 NTNG1Q9Y2I2 539 aa14□□□□□ -0.17
MKS1-202ENST00000393119 CHST2Q9Y4C5 530 aa14□□□□□ -0.17
MKS1-202ENST00000393119 PCDHGA8Q9Y5G5 932 aa14□□□□□ -0.17
MKS1-202ENST00000393119 GPR179Q6PRD1 2367 aa14□□□□□ -0.17
MKS1-202ENST00000393119 CELSR3Q9NYQ7 3312 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 A0A087WXM4 84 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 TLCD2A6NGC4 264 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 TMEM150CB9EJG8 249 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 TMX2-CTNND1H3BSU7 103 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 PCDHGA12O60330 932 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 GPR75O95800 540 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 ACP2P11117 423 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 PTNP21246 168 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 AGXTP21549 392 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 IGFBP5P24593 272 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 BCAP31P51572 246 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 PIGFQ07326 219 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 MGAT2Q10469 447 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 SLC13A2Q13183 592 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 PIN1Q13526 163 aaPredicted RBP13.99□□□□□ -0.17
MKS1-202ENST00000393119 CTU2Q2VPK5 515 aaKnown RBP13.99□□□□□ -0.17
MKS1-202ENST00000393119 ZC3H12BQ5HYM0 836 aaKnown RBP13.99□□□□□ -0.17
MKS1-202ENST00000393119 MLIPQ5VWP3 458 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 TTLL10Q6ZVT0 673 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 GPR141Q7Z602 305 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 CLVS1Q8IUQ0 354 aaPredicted RBP13.99□□□□□ -0.17
MKS1-202ENST00000393119 SDR16C5Q8N3Y7 309 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 ATG16L2Q8NAA4 619 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 FEVQ99581 238 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 SLC38A1Q9H2H9 487 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 UCK1Q9HA47 277 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 PRMT8Q9NR22 394 aaPredicted RBP13.99□□□□□ -0.17
MKS1-202ENST00000393119 ACER3Q9NUN7 267 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 TTC28Q96AY4 2481 aa13.99□□□□□ -0.17
MKS1-202ENST00000393119 LY6G6EA0A0G2JKS1 128 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 FPR1P21462 350 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 HOXD12P35452 270 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 XCR1P46094 333 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 KCNJ5P48544 419 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 KHKP50053 298 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 PRR5P85299 388 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 FHL5Q5TD97 284 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 TCTN3Q6NUS6 607 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 MFSD12Q6NUT3 480 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 TTC33Q6PID6 262 aaPredicted RBP13.98□□□□□ -0.17
MKS1-202ENST00000393119 ZNF574Q6ZN55 896 aaPredicted RBP13.98□□□□□ -0.17
MKS1-202ENST00000393119 HIPK1Q86Z02 1210 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 OR56A1Q8NGH5 318 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 EDAQ92838 391 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 PLEKHA8Q96JA3 519 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 C3orf14Q9HBI5 128 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 CLDN16Q9Y5I7 305 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 U3KQA8 63 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 TP53BP1Q12888 1972 aaPredicted RBP13.98□□□□□ -0.17
MKS1-202ENST00000393119 TRBV4-1A0A0J9YWV2 114 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 TMEM247A6NEH6 219 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 H3BMQ9 156 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 SIGLEC6O43699 453 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 NUDT21O43809 227 aaKnown RBP13.98□□□□□ -0.17
MKS1-202ENST00000393119 GDF9O60383 454 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 GLB1P16278 677 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 DDX5P17844 614 aaKnown RBP13.98□□□□□ -0.17
MKS1-202ENST00000393119 ZNF10P21506 573 aaPredicted RBP13.98□□□□□ -0.17
MKS1-202ENST00000393119 RFX3P48380 749 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 CLK3P49761 638 aaKnown RBP13.98□□□□□ -0.17
MKS1-202ENST00000393119 EFNA3P52797 238 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 RAB38P57729 211 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 RAPSNQ13702 412 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 PRICKLE4Q2TBC4 344 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 C1orf189Q5VU69 101 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms