RNA–Protein interactions for RNA: ENST00000392789.2

SC5D-202, Transcript of sterol-C5-desaturase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SC5D, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-202ENST00000392789 WBP1LQ9NX94 342 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 APOBEC3BQ9UH17 382 aaKnown RBP13.75□□□□□ -0.21
SC5D-202ENST00000392789 LIPT1Q9Y234 373 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 KCNE3Q9Y6H6 103 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 ZNF780BQ9Y6R6 833 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 COLEC10Q9Y6Z7 277 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 REV3LO60673 3130 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 HYKKA2RU49 373 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 PROM1O43490 865 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 ALPPP05187 535 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 ASGR2P07307 311 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 TIE1P35590 1138 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 CRYBB2P43320 205 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 SNAPC1Q16533 368 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 KLHL22Q53GT1 634 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 ACSM5Q6NUN0 579 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 FLCNQ8NFG4 579 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 OR52I1Q8NGK6 324 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 TEX47Q8TBZ9 253 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 ARHGDIGQ99819 225 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 KXD1Q9BQD3 176 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 SLC30A2Q9BRI3 323 aa13.75□□□□□ -0.21
SC5D-202ENST00000392789 QRSL1Q9H0R6 528 aaKnown RBP13.75□□□□□ -0.21
SC5D-202ENST00000392789 A0A1W2PS29 197 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 IRGMA1A4Y4 181 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 SNTNA6NMZ2 147 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 ISM1B1AKI9 464 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 ZNF670-ZNF695F2Z2N8 137 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 GDI1P31150 447 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 RPS19P39019 145 aaKnown RBP13.74□□□□□ -0.21
SC5D-202ENST00000392789 SEC13P55735 322 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 LSM11P83369 360 aaKnown RBP eCLIP13.74□□□□□ -0.21
SC5D-202ENST00000392789 EFNB1P98172 346 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 TRAM2Q15035 370 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 TJAP1Q5JTD0 557 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 NRROSQ86YC3 692 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 C7orf61Q8IZ16 206 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 OR9A2Q8NGT5 310 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 GNPDA2Q8TDQ7 276 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 FGF11Q92914 225 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 ELP4Q96EB1 424 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 CCDC32Q9BV29 185 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 SLC38A1Q9H2H9 487 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 CERS4Q9HA82 394 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 EQTNQ9NQ60 294 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 TESQ9UGI8 421 aaKnown RBP13.74□□□□□ -0.21
SC5D-202ENST00000392789 SSR3Q9UNL2 185 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 A0A087WUU8 490 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 CTDSP2O14595 271 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 CYP7B1O75881 506 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 GSTT2P0CG29 244 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 GSTT2BP0CG30 244 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 IFNA8P32881 189 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 RORCP51449 518 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 C3orf38Q5JPI3 329 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 ATAD3BQ5T9A4 648 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 SLC27A4Q6P1M0 643 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 PAQR6Q6TCH4 344 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 SLC36A4Q6YBV0 504 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 USP30Q70CQ3 517 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 C16orf62Q7Z3J2 963 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 KIF18BQ86Y91 864 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 PHC2Q8IXK0 858 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 ZNF784Q8NCA9 323 aaPredicted RBP13.74□□□□□ -0.21
SC5D-202ENST00000392789 TMEM163Q8TC26 289 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 FAM131CQ96AQ9 280 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 SCARF2Q96GP6 870 aaPredicted RBP13.74□□□□□ -0.21
SC5D-202ENST00000392789 ZNF681Q96N22 645 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 OR2M4Q96R27 311 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 PLA2G12AQ9BZM1 189 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 MKRN2Q9H000 416 aaKnown RBP13.74□□□□□ -0.21
SC5D-202ENST00000392789 TRIM45Q9H8W5 580 aaPredicted RBP13.74□□□□□ -0.21
SC5D-202ENST00000392789 SYNPO2LQ9H987 977 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 OR6C2Q9NZP2 312 aa13.74□□□□□ -0.21
SC5D-202ENST00000392789 SNRNP200O75643 2136 aaKnown RBP13.73□□□□□ -0.21
SC5D-202ENST00000392789 FAM170BA6NMN3 283 aa13.73□□□□□ -0.21
SC5D-202ENST00000392789 SCAMP1O15126 338 aa13.73□□□□□ -0.21
SC5D-202ENST00000392789 CHRM5P08912 532 aaPredicted RBP13.73□□□□□ -0.21
SC5D-202ENST00000392789 NR2F6P10588 404 aa13.73□□□□□ -0.21
SC5D-202ENST00000392789 MYL12AP19105 171 aa13.73□□□□□ -0.21
SC5D-202ENST00000392789 MAT2AP31153 395 aaKnown RBP13.73□□□□□ -0.21
SC5D-202ENST00000392789 KIR2DL1P43626 348 aaPredicted RBP13.73□□□□□ -0.21
SC5D-202ENST00000392789 ADPRHP54922 357 aa13.73□□□□□ -0.21
SC5D-202ENST00000392789 BTN3A2P78410 334 aa13.73□□□□□ -0.21
SC5D-202ENST00000392789 CHRNEQ04844 493 aa13.73□□□□□ -0.21
SC5D-202ENST00000392789 LIPKQ5VXJ0 399 aa13.73□□□□□ -0.21
SC5D-202ENST00000392789 FAM109BQ6ICB4 259 aaPredicted RBP13.73□□□□□ -0.21
SC5D-202ENST00000392789 MTSS1LQ765P7 747 aa13.73□□□□□ -0.21
SC5D-202ENST00000392789 AMIGO1Q86WK6 493 aa13.73□□□□□ -0.21
SC5D-202ENST00000392789 LCN9Q8WX39 176 aa13.73□□□□□ -0.21
SC5D-202ENST00000392789 JPH3Q8WXH2 748 aaPredicted RBP13.73□□□□□ -0.21
SC5D-202ENST00000392789 GAL3ST3Q96A11 431 aa13.73□□□□□ -0.21
SC5D-202ENST00000392789 ACTRT3Q9BYD9 372 aa13.73□□□□□ -0.21
SC5D-202ENST00000392789 PRRG3Q9BZD7 231 aa13.73□□□□□ -0.21
SC5D-202ENST00000392789 KLHL25Q9H0H3 589 aa13.73□□□□□ -0.21
SC5D-202ENST00000392789 ANKRD19PQ9H560 264 aa13.73□□□□□ -0.21
SC5D-202ENST00000392789 EGLN3Q9H6Z9 239 aa13.73□□□□□ -0.21
SC5D-202ENST00000392789 FGF22Q9HCT0 170 aa13.73□□□□□ -0.21
SC5D-202ENST00000392789 CAB39Q9Y376 341 aaPredicted RBP13.73□□□□□ -0.21
SC5D-202ENST00000392789 XIRP2A4UGR9 3374 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms