RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 WDR53Q7Z5U6 358 aaPredicted RBP10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 CDRT4Q8N9R6 151 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 ATG16L2Q8NAA4 619 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 SLC9A6Q92581 669 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 CDS1Q92903 461 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 STACQ99469 402 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 RBCK1Q9BYM8 510 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 GAREM1Q9H706 876 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 PRTFDC1Q9NRG1 225 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 DUSP22Q9NRW4 184 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 TMEM184BQ9Y519 407 aaPredicted RBP10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 LOC100130705A0A1B0GUX0 176 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 ARRDC5A6NEK1 342 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 TGFBR3LH3BV60 316 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 SYT5O00445 386 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZNF749O43361 778 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 SIGLEC6O43699 453 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 MITFO75030 526 aaPredicted RBP10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 UGT2B11O75310 529 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 NME6O75414 186 aaPredicted RBP10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 LGI1O95970 557 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 ALPPP05187 535 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 PABPC4LP0CB38 370 aaKnown RBP10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 MAP3K8P41279 467 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 HSD17B7P56937 341 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 CHRNEQ04844 493 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 STX4Q12846 297 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 DUSP5Q16690 384 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 SYT16Q17RD7 645 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 EXOC3L2Q2M3D2 409 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 SNAP47Q5SQN1 464 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 TCTN3Q6NUS6 607 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 TMEM71Q6P5X7 295 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 MED25Q71SY5 747 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 C8orf59Q8N0T1 100 aaPredicted RBP10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 VWA5B2Q8N398 1253 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 CHDHQ8NE62 594 aaPredicted RBP10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 OR10G2Q8NGC3 310 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 OR51Q1Q8NH59 317 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 HOXB13Q92826 284 aaPredicted RBP10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 DHRS1Q96LJ7 313 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 SH3GL3Q99963 347 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 NUDT22Q9BRQ3 303 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 YTHDF1Q9BYJ9 559 aaKnown RBP10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 CXorf21Q9HAI6 301 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 ADAP2Q9NPF8 381 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 KRT84Q9NSB2 600 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 ACAD8Q9UKU7 415 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 SATB2Q9UPW6 733 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 SLC9A8Q9Y2E8 581 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 CLDN16Q9Y5I7 305 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 TRIM64A6NGJ6 449 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 FFAR1O14842 300 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 GADD45GO95257 159 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZIC2O95409 532 aaPredicted RBP10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 EPPINO95925 133 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 ALOX5P09917 674 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 ANXA8P13928 327 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 FOLR1P15328 257 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 RPS6KA3P51812 740 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 PDX1P52945 283 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 COLEC12Q5KU26 742 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 YOD1Q5VVQ6 348 aaPredicted RBP10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 MLIPQ5VWP3 458 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 GUSBP11Q6P575 273 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 FRRS1Q6ZNA5 592 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 DGAT2L6Q6ZPD8 337 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 THAP5Q7Z6K1 395 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 GALNT5Q7Z7M9 940 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 COMTD1Q86VU5 262 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 GALNT12Q8IXK2 581 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZNF786Q8N393 782 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 METTL27Q8N6F8 245 aaPredicted RBP10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 OR4D11Q8NGI4 311 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 OR52J3Q8NH60 311 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 OR1L3Q8NH93 324 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 GRIP2Q9C0E4 1043 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 TRIM45Q9H8W5 580 aaPredicted RBP10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 NUP210LQ5VU65 1888 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 EME2A4GXA9 379 aaPredicted RBP10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 SEMA7AO75326 666 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 SEC24DO94855 1032 aaPredicted RBP10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 SOX30O94993 753 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 CBX7O95931 251 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 CLPTM1O96005 669 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 ANKRD34CP0C6C1 535 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 PRKAR1BP31321 381 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 BIKQ13323 160 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 KEAP1Q14145 624 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 GANABQ14697 944 aaKnown RBP10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 EXOSC7Q15024 291 aaKnown RBP10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZNF311Q5JNZ3 666 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 PERM1Q5SV97 790 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZNF691Q5VV52 312 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 TYW3Q6IPR3 259 aaKnown RBP10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 LACC1Q8IV20 430 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 GPR135Q8IZ08 494 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 TSPAN14Q8NG11 270 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 VANGL1Q8TAA9 524 aaPredicted RBP10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 PHF10Q8WUB8 498 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms