RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 TBC1D31Q96DN5 1066 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 ADNPQ9H2P0 1102 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 ACTR8Q9H981 624 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 GNB4Q9HAV0 340 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 PAK5Q9P286 719 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 CGNQ9P2M7 1197 aaKnown RBP2.5□□□□□ -2.01
PTPRC-205ENST00000391970 PURGQ9UJV8 347 aaKnown RBP2.5□□□□□ -2.01
PTPRC-205ENST00000391970 SLC9A8Q9Y2E8 581 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 DDX49Q9Y6V7 483 aaKnown RBP2.5□□□□□ -2.01
PTPRC-205ENST00000391970 AKNAQ7Z591 1439 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 BRD4O60885 1362 aaPredicted RBP2.49□□□□□ -2.01
PTPRC-205ENST00000391970 PRDM15P57071 1507 aaPredicted RBP2.49□□□□□ -2.01
PTPRC-205ENST00000391970 ERICH3Q5RHP9 1530 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 NPIPA5A0A0B4J1W7 369 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 A0A1B0GTH9 108 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 A0A1B0GU03 582 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 FAM230AA0A1W2PPH8 454 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 ACOD1A6NK06 481 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 SHISA9B4DS77 424 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 NPIPA5E9PKD4 350 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 E9PMD0 336 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 F8WDY8 70 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 SGK494L7N484 410 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 LGALS8O00214 317 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 MPHOSPH10O00566 681 aaKnown RBP2.49□□□□□ -2.01
PTPRC-205ENST00000391970 AKR7A3O95154 331 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 GAS8-AS1O95177 125 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 ECDO95905 644 aaPredicted RBP2.49□□□□□ -2.01
PTPRC-205ENST00000391970 RENP00797 406 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 IGHV3-13P01766 116 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 SERPINB2P05120 415 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 HOXD4P09016 255 aaPredicted RBP2.49□□□□□ -2.01
PTPRC-205ENST00000391970 PTPN6P29350 595 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 PPP2R1BP30154 601 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 CASQ1P31415 396 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 SAA4P35542 130 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 PGFP49763 221 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 VCPP55072 806 aaKnown RBP2.49□□□□□ -2.01
PTPRC-205ENST00000391970 HERVK_113P63132 956 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 ERVK-8P63133 956 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 GSTO1P78417 241 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 ZNF85Q03923 595 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 CD226Q15762 336 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 PARP6Q2NL67 630 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 ZNF506Q5JVG8 444 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 REP15Q6BDI9 236 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 SASS6Q6UVJ0 657 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 ADAMTSL5Q6ZMM2 481 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 CCDC73Q6ZRK6 1079 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 TMUB2Q71RG4 321 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 TIPARPQ7Z3E1 657 aaKnown RBP2.49□□□□□ -2.01
PTPRC-205ENST00000391970 LRRC49Q8IUZ0 686 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 ARFGAP2Q8N6H7 521 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 FAM184AQ8NB25 1140 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 DRAXINQ8NBI3 349 aaPredicted RBP2.49□□□□□ -2.01
PTPRC-205ENST00000391970 CSNK1G2-AS1Q8NCQ2 148 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 OR52B4Q8NGK2 314 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 OR4Q3Q8NH05 313 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 ANKRD7Q92527 254 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 LHX4Q969G2 390 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 MCHR2Q969V1 340 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 RAB3CQ96E17 227 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 ATOH8Q96SQ7 321 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 TTYH2Q9BSA4 534 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 APOOQ9BUR5 198 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 RBM24Q9BX46 236 aaKnown RBP2.49□□□□□ -2.01
PTPRC-205ENST00000391970 ERVK-6Q9BXR3 956 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 TRIM6Q9C030 488 aaPredicted RBP2.49□□□□□ -2.01
PTPRC-205ENST00000391970 CCSER1Q9C0I3 900 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 ALG9Q9H6U8 611 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 ECT2Q9H8V3 914 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 ELL3Q9HB65 397 aaPredicted RBP2.49□□□□□ -2.01
PTPRC-205ENST00000391970 ADGRL4Q9HBW9 690 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 HOXC10Q9NYD6 342 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 MBD2Q9UBB5 411 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 P2RX2Q9UBL9 471 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 MLXQ9UH92 298 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 FZR1Q9UM11 496 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 AURKCQ9UQB9 309 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 MRPL11Q9Y3B7 192 aaKnown RBP2.49□□□□□ -2.01
PTPRC-205ENST00000391970 SCAF11Q99590 1463 aaKnown RBP2.49□□□□□ -2.01
PTPRC-205ENST00000391970 NCAPD2Q15021 1401 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 PIK3R4Q99570 1358 aa2.49□□□□□ -2.01
PTPRC-205ENST00000391970 MAPKBP1O60336 1514 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 ABCC4O15439 1325 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 ATP8B3O60423 1300 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 PCNX3Q9H6A9 2034 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 RNF222A6NCQ9 220 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 LRIT2A6NDA9 550 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 FBLL1A6NHQ2 334 aaKnown RBP2.48□□□□□ -2.01
PTPRC-205ENST00000391970 H3BMH7 237 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 K7ERI5 159 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 PDLIM1O00151 329 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 PDXKO00764 312 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 EI24O14681 340 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 MCF2LO15068 1137 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 LANCL1O43813 399 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 RANBP6O60518 1105 aaKnown RBP2.48□□□□□ -2.01
PTPRC-205ENST00000391970 TOM1L1O75674 476 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 BBOX1O75936 387 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms