RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 RTBDNQ9BSG5 229 aaPredicted RBP1.97□□□□□ -2.09
TRAV40-201ENST00000390467 SLC25A39Q9BZJ4 359 aaPredicted RBP1.97□□□□□ -2.09
TRAV40-201ENST00000390467 ALDH8A1Q9H2A2 487 aaPredicted RBP1.97□□□□□ -2.09
TRAV40-201ENST00000390467 TSPY26PQ9H489 355 aa1.97□□□□□ -2.09
TRAV40-201ENST00000390467 SLC9A8Q9Y2E8 581 aa1.97□□□□□ -2.09
TRAV40-201ENST00000390467 CA11O75493 328 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 NOL4O94818 638 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 GAS8O95995 478 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 CYP3A5P20815 502 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 RBMXP38159 391 aaKnown RBP1.96□□□□□ -2.1
TRAV40-201ENST00000390467 GEMP55040 296 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 ST8SIA6P61647 398 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 RBP5P82980 135 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 CDKL1Q00532 357 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 GK2Q14410 553 aaPredicted RBP1.96□□□□□ -2.1
TRAV40-201ENST00000390467 EXOSC7Q15024 291 aaKnown RBP1.96□□□□□ -2.1
TRAV40-201ENST00000390467 PRR4Q16378 134 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 MEP1BQ16820 701 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 ANKRD20A4Q4UJ75 823 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 ANKRD20A8PQ5CZ79 823 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 ANKRD20A2Q5SQ80 823 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 ANKRD20A1Q5TYW2 823 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 ANKRD20A3Q5VUR7 823 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 KCTD11Q693B1 232 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 UFSP1Q6NVU6 142 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 ZSCAN30Q86W11 494 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 STHQ8IWL8 128 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 C9orf40Q8IXQ3 194 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 OR4F17Q8NGA8 305 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 C11orf24Q96F05 449 aaPredicted RBP1.96□□□□□ -2.1
TRAV40-201ENST00000390467 DHTKD1Q96HY7 919 aaPredicted RBP1.96□□□□□ -2.1
TRAV40-201ENST00000390467 OR4F4Q96R69 305 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 MYCBPQ99417 103 aaPredicted RBP1.96□□□□□ -2.1
TRAV40-201ENST00000390467 UTP14AQ9BVJ6 771 aaKnown RBP1.96□□□□□ -2.1
TRAV40-201ENST00000390467 SCRT1Q9BWW7 348 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 TSSK1BQ9BXA7 367 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 CCSER1Q9C0I3 900 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 ZNF350Q9GZX5 532 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 NAPBQ9H115 298 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 CARD9Q9H257 536 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 GANQ9H2C0 597 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 Q9H3A6 140 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 EHD1Q9H4M9 534 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 DCLRE1BQ9H816 532 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 RNPEPL1Q9HAU8 725 aa1.96□□□□□ -2.1
TRAV40-201ENST00000390467 SPRR5A0A1B0GTR4 108 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 A0A1W2PRQ8 180 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 CRCPO75575 148 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 PGK1P00558 417 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 PTBP1P26599 531 aaKnown RBP eCLIP1.95□□□□□ -2.1
TRAV40-201ENST00000390467 UGT1A3P35503 534 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 ACVR1BP36896 505 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 HERV-K104P63124 156 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 STXBP2Q15833 593 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 CCDC92Q53HC0 331 aaPredicted RBP1.95□□□□□ -2.1
TRAV40-201ENST00000390467 ATRAIDQ6UW56 229 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 ASRGL1Q7L266 308 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 ANKRD23Q86SG2 305 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 ERICH1Q86X53 443 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 MCOLN2Q8IZK6 566 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 CADM2Q8N3J6 435 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 SIDT2Q8NBJ9 832 aaKnown RBP1.95□□□□□ -2.1
TRAV40-201ENST00000390467 OR10H4Q8NGA5 316 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 LHX4Q969G2 390 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 CTRCQ99895 268 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 ANP32EQ9BTT0 268 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 PATZ1Q9HBE1 687 aaKnown RBP1.95□□□□□ -2.1
TRAV40-201ENST00000390467 PNPLA3Q9NST1 481 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 RAB26Q9ULW5 256 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 KLHDC2Q9Y2U9 406 aa1.95□□□□□ -2.1
TRAV40-201ENST00000390467 C13orf42A0A1B0GVH6 325 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 A4D1N5 150 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 WWP2O00308 870 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 MAGEB4O15481 346 aaPredicted RBP1.94□□□□□ -2.1
TRAV40-201ENST00000390467 DFNA5O60443 496 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 FOXH1O75593 365 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 IGHDP01880 384 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 HSP90AB1P08238 724 aaKnown RBP1.94□□□□□ -2.1
TRAV40-201ENST00000390467 HOXB7P09629 217 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 SCG2P13521 617 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 STIP1P31948 543 aaKnown RBP1.94□□□□□ -2.1
TRAV40-201ENST00000390467 FAM133BQ5BKY9 247 aaKnown RBP1.94□□□□□ -2.1
TRAV40-201ENST00000390467 ZNF789Q5FWF6 425 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 LGSNQ5TDP6 509 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 PRAMEF8Q5VWM4 474 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 TMEM179BQ7Z7N9 219 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 SYVN1Q86TM6 617 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 SLC22A16Q86VW1 577 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 VSIG1Q86XK7 387 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 CHCHD4Q8N4Q1 142 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 BBS1Q8NFJ9 593 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 MARC2Q969Z3 335 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 RPGRIP1Q96KN7 1286 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 ACCSQ96QU6 501 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 CACNG6Q9BXT2 260 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 ALG9Q9H6U8 611 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 ITM2BQ9Y287 266 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 PRG3Q9Y2Y8 225 aaPredicted RBP1.94□□□□□ -2.1
TRAV40-201ENST00000390467 LTBP1Q14766 1721 aa1.94□□□□□ -2.1
TRAV40-201ENST00000390467 SYNJ2O15056 1496 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms