RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 ZNF180Q9UJW8 692 aa24.07■■□□□ 1.44
NPHP3-202ENST00000383282 MAPRE3Q9UPY8 281 aa24.07■■□□□ 1.44
NPHP3-202ENST00000383282 EXO1Q9UQ84 846 aaKnown RBP24.07■■□□□ 1.44
NPHP3-202ENST00000383282 FREM3P0C091 2139 aa24.07■■□□□ 1.44
NPHP3-202ENST00000383282 PRAMEF25A6NGN4 478 aa24.06■■□□□ 1.44
NPHP3-202ENST00000383282 FRG2CA6NGY1 282 aa24.06■■□□□ 1.44
NPHP3-202ENST00000383282 A8MT66 165 aa24.06■■□□□ 1.44
NPHP3-202ENST00000383282 TRIM49D1C9J1S8 452 aa24.06■■□□□ 1.44
NPHP3-202ENST00000383282 POC1B-GALNT4F8VUJ3 575 aa24.06■■□□□ 1.44
NPHP3-202ENST00000383282 CBX7O95931 251 aa24.06■■□□□ 1.44
NPHP3-202ENST00000383282 TMIGD3P0DMS9 266 aaPredicted RBP24.06■■□□□ 1.44
NPHP3-202ENST00000383282 TSPAN8P19075 237 aa24.06■■□□□ 1.44
NPHP3-202ENST00000383282 DRD5P21918 477 aa24.06■■□□□ 1.44
NPHP3-202ENST00000383282 PPICP45877 212 aa24.06■■□□□ 1.44
NPHP3-202ENST00000383282 TRMT12Q53H54 448 aaKnown RBP24.06■■□□□ 1.44
NPHP3-202ENST00000383282 DESI1Q6ICB0 168 aa24.06■■□□□ 1.44
NPHP3-202ENST00000383282 CAMKMTQ7Z624 323 aa24.06■■□□□ 1.44
NPHP3-202ENST00000383282 C1orf52Q8N6N3 182 aaKnown RBP24.06■■□□□ 1.44
NPHP3-202ENST00000383282 OR14L1PQ8NHC6 308 aa24.06■■□□□ 1.44
NPHP3-202ENST00000383282 ALPK1Q96QP1 1244 aa24.06■■□□□ 1.44
NPHP3-202ENST00000383282 C1QTNF3Q9BXJ4 246 aa24.06■■□□□ 1.44
NPHP3-202ENST00000383282 SERHLQ9NQF3 203 aa24.06■■□□□ 1.44
NPHP3-202ENST00000383282 EHD3Q9NZN3 535 aa24.06■■□□□ 1.44
NPHP3-202ENST00000383282 UTS2RQ9UKP6 389 aa24.06■■□□□ 1.44
NPHP3-202ENST00000383282 A0A1B0GTL3 188 aa24.05■■□□□ 1.44
NPHP3-202ENST00000383282 C2orf72A6NCS6 295 aa24.05■■□□□ 1.44
NPHP3-202ENST00000383282 H0Y3Z8 333 aa24.05■■□□□ 1.44
NPHP3-202ENST00000383282 PPP6CO00743 305 aa24.05■■□□□ 1.44
NPHP3-202ENST00000383282 UGT2B11O75310 529 aa24.05■■□□□ 1.44
NPHP3-202ENST00000383282 ERN1O75460 977 aaKnown RBP24.05■■□□□ 1.44
NPHP3-202ENST00000383282 BCAS2O75934 225 aaPredicted RBP24.05■■□□□ 1.44
NPHP3-202ENST00000383282 HSD3B1P14060 373 aa24.05■■□□□ 1.44
NPHP3-202ENST00000383282 CPN1P15169 458 aa24.05■■□□□ 1.44
NPHP3-202ENST00000383282 KLK2P20151 261 aa24.05■■□□□ 1.44
NPHP3-202ENST00000383282 HSD3B2P26439 372 aa24.05■■□□□ 1.44
NPHP3-202ENST00000383282 ECHS1P30084 290 aa24.05■■□□□ 1.44
NPHP3-202ENST00000383282 PTGDSP41222 190 aa24.05■■□□□ 1.44
NPHP3-202ENST00000383282 SCIMPQ6UWF3 145 aa24.05■■□□□ 1.44
NPHP3-202ENST00000383282 C9orf106Q8NAJ2 232 aa24.05■■□□□ 1.44
NPHP3-202ENST00000383282 CNRIP1Q96F85 164 aaPredicted RBP24.05■■□□□ 1.44
NPHP3-202ENST00000383282 ZFP3Q96NJ6 502 aa24.05■■□□□ 1.44
NPHP3-202ENST00000383282 HBEGFQ99075 208 aa24.05■■□□□ 1.44
NPHP3-202ENST00000383282 PRRC2AP48634 2157 aaKnown RBP24.05■■□□□ 1.44
NPHP3-202ENST00000383282 AKAP6Q13023 2319 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 TO15178 435 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 ABCB7O75027 752 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 OR4F21O95013 312 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 GOSR1O95249 250 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 KRT6AP02538 564 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 KRT6BP04259 564 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 PCSK2P16519 638 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 TAC1P20366 129 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 KRT6CP48668 564 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 EMDP50402 254 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 CLCQ05315 142 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 DUSP2Q05923 314 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 LTB4RQ15722 352 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 KRTAP21-3Q3LHN1 58 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 FAM180BQ6P0A1 224 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 SAMD14Q8IZD0 417 aaPredicted RBP24.04■■□□□ 1.44
NPHP3-202ENST00000383282 SIMC1Q8NDZ2 872 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 RDH11Q8TC12 318 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 DCAKDQ8WVC6 231 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 ZNF681Q96N22 645 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 TM9SF2Q99805 663 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 OR2B2Q9GZK3 357 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 JKAMPQ9P055 326 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 MCM8Q9UJA3 840 aa24.04■■□□□ 1.44
NPHP3-202ENST00000383282 ITPR3Q14573 2671 aa24.03■■□□□ 1.44
NPHP3-202ENST00000383282 OR6C70A6NIJ9 312 aa24.03■■□□□ 1.44
NPHP3-202ENST00000383282 REM1O75628 298 aa24.03■■□□□ 1.44
NPHP3-202ENST00000383282 HSD17B3P37058 310 aa24.03■■□□□ 1.44
NPHP3-202ENST00000383282 MRPS35P82673 323 aaKnown RBP24.03■■□□□ 1.44
NPHP3-202ENST00000383282 SRYQ05066 204 aa24.03■■□□□ 1.44
NPHP3-202ENST00000383282 RASA2Q15283 850 aa24.03■■□□□ 1.44
NPHP3-202ENST00000383282 PAMR1Q6UXH9 720 aa24.03■■□□□ 1.44
NPHP3-202ENST00000383282 IFNEQ86WN2 208 aa24.03■■□□□ 1.44
NPHP3-202ENST00000383282 CDYL2Q8N8U2 506 aa24.03■■□□□ 1.44
NPHP3-202ENST00000383282 LINC01560Q8TB33 94 aa24.03■■□□□ 1.44
NPHP3-202ENST00000383282 ZNF675Q8TD23 568 aa24.03■■□□□ 1.44
NPHP3-202ENST00000383282 TMBIM1Q969X1 311 aa24.03■■□□□ 1.44
NPHP3-202ENST00000383282 ERP27Q96DN0 273 aa24.03■■□□□ 1.44
NPHP3-202ENST00000383282 COL21A1Q96P44 957 aa24.03■■□□□ 1.44
NPHP3-202ENST00000383282 TUBA1CQ9BQE3 449 aa24.03■■□□□ 1.44
NPHP3-202ENST00000383282 YIPF4Q9BSR8 244 aa24.03■■□□□ 1.44
NPHP3-202ENST00000383282 SFXN3Q9BWM7 321 aa24.03■■□□□ 1.44
NPHP3-202ENST00000383282 ACBD3Q9H3P7 528 aa24.03■■□□□ 1.44
NPHP3-202ENST00000383282 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.03■■□□□ 1.44
NPHP3-202ENST00000383282 V9GYY5 206 aaPredicted RBP24.03■■□□□ 1.44
NPHP3-202ENST00000383282 A0A087WUV0 522 aaPredicted RBP24.02■■□□□ 1.44
NPHP3-202ENST00000383282 SUPT7LO94864 414 aa24.02■■□□□ 1.44
NPHP3-202ENST00000383282 SNRPAP09012 282 aaKnown RBP24.02■■□□□ 1.44
NPHP3-202ENST00000383282 SOX18P35713 384 aa24.02■■□□□ 1.44
NPHP3-202ENST00000383282 KRT20P35900 424 aa24.02■■□□□ 1.44
NPHP3-202ENST00000383282 CPA2P48052 419 aa24.02■■□□□ 1.44
NPHP3-202ENST00000383282 CSTF3Q12996 717 aaKnown RBP24.02■■□□□ 1.44
NPHP3-202ENST00000383282 ERCC6LQ2NKX8 1250 aa24.02■■□□□ 1.44
NPHP3-202ENST00000383282 LGSNQ5TDP6 509 aa24.02■■□□□ 1.44
NPHP3-202ENST00000383282 AAGABQ6PD74 315 aa24.02■■□□□ 1.44
NPHP3-202ENST00000383282 PLCZ1Q86YW0 608 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms