RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 C8orf82Q6P1X6 216 aaPredicted RBP5.45□□□□□ -1.54
RFC1-202ENST00000381897 ZNF529Q6P280 563 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 FBXO46Q6PJ61 603 aaPredicted RBP5.45□□□□□ -1.54
RFC1-202ENST00000381897 METAP1DQ6UB28 335 aaPredicted RBP5.45□□□□□ -1.54
RFC1-202ENST00000381897 GLT6D1Q7Z4J2 308 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 DCXRQ7Z4W1 244 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 MOGAT3Q86VF5 341 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 GPR65Q8IYL9 337 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 OR52E4Q8NGH9 312 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 OR52J3Q8NH60 311 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 SPATA22Q8NHS9 363 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 MARVELD3Q96A59 401 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 CLUHP3Q96NS8 147 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 SERPINB11Q96P15 392 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 MCCC1Q96RQ3 725 aaPredicted RBP5.45□□□□□ -1.54
RFC1-202ENST00000381897 INTS14Q96SY0 518 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 RERGLQ9H628 205 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 MED11Q9P086 117 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 COPZ2Q9P299 210 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 OR10H1Q9Y4A9 318 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 A0A1B0GVM2 712 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 A0A1W2PNR3 127 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 TCRBV16S1A1N1A0A5B0 115 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 MGAT4DA6NG13 374 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 E9PI62 339 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 ATP6V1G2-DDX39BF2Z307 99 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 LINC01387J3KSC0 135 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 ARPC3O15145 178 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 TYMPP19971 482 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 LCN1P31025 176 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 WNT7BP56706 349 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 RPS14P62263 151 aaKnown RBP5.45□□□□□ -1.54
RFC1-202ENST00000381897 IFITM2Q01629 132 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 SMARCB1Q12824 385 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 CRHR2Q13324 411 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 PPIGQ13427 754 aaKnown RBP eCLIP5.45□□□□□ -1.541e-9■■■■■ 46.1
RFC1-202ENST00000381897 GRIK4Q16099 956 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 TMEM44Q2T9K0 475 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 CTU2Q2VPK5 515 aaKnown RBP5.45□□□□□ -1.54
RFC1-202ENST00000381897 ARHGAP40Q5TG30 622 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 HACD4Q5VWC8 232 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 TBPL2Q6SJ96 375 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 USP30Q70CQ3 517 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 GPALPP1Q8IXQ4 340 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 C11orf65Q8NCR3 313 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 ABHD5Q8WTS1 349 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 TIMD4Q96H15 378 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 MAP6Q96JE9 813 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 ZNF578Q96N58 590 aaPredicted RBP5.45□□□□□ -1.54
RFC1-202ENST00000381897 SMOQ99835 787 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 TREX2Q9BQ50 279 aaPredicted RBP5.45□□□□□ -1.54
RFC1-202ENST00000381897 FDXACB1Q9BRP7 624 aaPredicted RBP5.45□□□□□ -1.54
RFC1-202ENST00000381897 BTBD2Q9BX70 525 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 SLC29A3Q9BZD2 475 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 MMP28Q9H239 520 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 HEBP1Q9NRV9 189 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 FAM105AQ9NUU6 356 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 ACOXLQ9NUZ1 547 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 SIX4Q9UIU6 781 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 ARFGEF1Q9Y6D6 1849 aa5.45□□□□□ -1.54
RFC1-202ENST00000381897 C22orf46C9J442 243 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 KRBOX1C9JBD0 128 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 PRRG2O14669 202 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 PRKYO43930 277 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 LCMT2O60294 686 aaKnown RBP5.44□□□□□ -1.54
RFC1-202ENST00000381897 SLC43A1O75387 559 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 SLC22A5O76082 557 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 CER1O95813 267 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 ABOP16442 354 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 CTRB1P17538 263 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 NPR2P20594 1047 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 BMPR1AP36894 532 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 OMPP47874 163 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 ANXA11P50995 505 aaKnown RBP5.44□□□□□ -1.54
RFC1-202ENST00000381897 AP3S2P59780 193 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 DUSP2Q05923 314 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 CXCL9Q07325 125 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 CNTN1Q12860 1018 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 HSPB3Q12988 150 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 GNA13Q14344 377 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 EXT1Q16394 746 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 YIF1BQ5BJH7 314 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 CTRB2Q6GPI1 263 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 DLK2Q6UY11 383 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 ZNF511Q8NB15 262 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 NETO2Q8NC67 525 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 NUP43Q8NFH3 380 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 REPS2Q8NFH8 660 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 OR7G3Q8NG95 312 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 CXorf40BQ96DE9 158 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 NXPE2Q96DL1 559 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 SLC38A2Q96QD8 506 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 NPY6RQ99463 290 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 ACTR6Q9GZN1 396 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.44□□□□□ -1.541e-7■■■■■ 43.3
RFC1-202ENST00000381897 OR51V1Q9H2C8 321 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 RGCCQ9H4X1 137 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 ENAMQ9NRM1 1142 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 POT1Q9NUX5 634 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 SLC27A6Q9Y2P4 619 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms