RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 WDYHV1Q96HA8 205 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 ZNF382Q96SR6 550 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 SH3GL2Q99962 352 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 PRDM14Q9GZV8 571 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 EPB41L4BQ9H329 900 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 PCDHGB3Q9Y5G1 929 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 ZNF780BQ9Y6R6 833 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 PRAMEF25A6NGN4 478 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 AHRRA9YTQ3 701 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 DVL2O14641 736 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 SNPHO15079 494 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 RIPK2O43353 540 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 ABHD2P08910 425 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 CEACAM8P31997 349 aaPredicted RBP12.9□□□□□ -0.34
SHOX-202ENST00000381575 KIR2DL3P43628 341 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 SLCO1A2P46721 670 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 ASCL1P50553 236 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 SRYQ05066 204 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 CSTF3Q12996 717 aaKnown RBP12.9□□□□□ -0.34
SHOX-202ENST00000381575 GLE1Q53GS7 698 aaKnown RBP12.9□□□□□ -0.34
SHOX-202ENST00000381575 ZNF628Q5EBL2 1059 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 POMZP3Q6PJE2 187 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 NPSR1Q6W5P4 371 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 SPNS3Q6ZMD2 512 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 TIFABQ6ZNK6 161 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 C16orf78Q8WTQ4 265 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 HSPBAP1Q96EW2 488 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 POLDIP3Q9BY77 421 aaKnown RBP12.9□□□□□ -0.34
SHOX-202ENST00000381575 NMRK1Q9NWW6 199 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 TBK1Q9UHD2 729 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 MCM8Q9UJA3 840 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 PSME2Q9UL46 239 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 CFL2Q9Y281 166 aa12.9□□□□□ -0.34
SHOX-202ENST00000381575 EEF1E1-BLOC1S5C9J1V9 151 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 EEF1E1O43324 174 aaKnown RBP12.89□□□□□ -0.35
SHOX-202ENST00000381575 ULK1O75385 1050 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 REM1O75628 298 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 CTAG2O75638 210 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 IL2RAP01589 272 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 RHOXF2BP0C7M4 288 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 PYGBP11216 843 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 ATP5F1P24539 256 aaPredicted RBP12.89□□□□□ -0.35
SHOX-202ENST00000381575 TACR1P25103 407 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 PPICP45877 212 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 IST1P53990 364 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 FOXA1P55317 472 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 ACSM2AQ08AH3 577 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 PRSS53Q2L4Q9 553 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 NSUN5P2Q63ZY6 315 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 ACSM2BQ68CK6 577 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 OR5M10Q6IEU7 315 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 NUP54Q7Z3B4 507 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 PM20D2Q8IYS1 436 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 CCNYL1Q8N7R7 359 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 WDSUB1Q8N9V3 476 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 C9orf106Q8NAJ2 232 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 ADOQ96SZ5 270 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 TUBA1CQ9BQE3 449 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 RHOXF2Q9BQY4 288 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 FBXL2Q9UKC9 423 aa12.89□□□□□ -0.35
SHOX-202ENST00000381575 FRG2CA6NGY1 282 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 SYT5O00445 386 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 ACOX3O15254 700 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 CT45A8P0DMV1 189 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 CT45A9P0DMV2 189 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 HSD3B1P14060 373 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 NAGAP17050 411 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 IMPDH1P20839 514 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 HSD3B2P26439 372 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 TIA1P31483 386 aaKnown RBP eCLIP12.88□□□□□ -0.35
SHOX-202ENST00000381575 TIMP3P35625 211 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 STARP49675 285 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 PRKAA2P54646 552 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 TRA2BP62995 288 aaKnown RBP12.88□□□□□ -0.35
SHOX-202ENST00000381575 LCP2Q13094 533 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 FLYWCH1Q4VC44 716 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 CT45A2Q5DJT8 189 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 NHSL2Q5HYW2 709 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 LGSNQ5TDP6 509 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 SLC30A6Q6NXT4 461 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 LRRN4CLQ8ND94 238 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 OR7G2Q8NG99 324 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 OR4N2Q8NGD1 307 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 OR14L1PQ8NHC6 308 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 RNASE6Q93091 150 aaKnown RBP12.88□□□□□ -0.35
SHOX-202ENST00000381575 EFHD2Q96C19 240 aaPredicted RBP12.88□□□□□ -0.35
SHOX-202ENST00000381575 MTBPQ96DY7 904 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 COL21A1Q96P44 957 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 CLEC4MQ9H2X3 399 aaPredicted RBP12.88□□□□□ -0.35
SHOX-202ENST00000381575 GSTO2Q9H4Y5 243 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 FOLH1BQ9HBA9 442 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 CCM2LQ9NUG4 571 aaPredicted RBP12.88□□□□□ -0.35
SHOX-202ENST00000381575 RYDENQ9NUL5 291 aaKnown RBP12.88□□□□□ -0.35
SHOX-202ENST00000381575 PRODH2Q9UF12 536 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 EMCNQ9ULC0 261 aa12.88□□□□□ -0.35
SHOX-202ENST00000381575 GPR55Q9Y2T6 319 aaPredicted RBP12.88□□□□□ -0.35
SHOX-202ENST00000381575 NUP214P35658 2090 aaPredicted RBP12.87□□□□□ -0.35
SHOX-202ENST00000381575 A0A1W2PPM1 405 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 B4DXG7 233 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 H0Y3Z8 333 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms