RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 MAPRE2Q15555 327 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 NNATQ16517 81 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 MEP1AQ16819 746 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 PIGGQ5H8A4 983 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 HLA-DQA1Q5Y7H0 255 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 MFSD12Q6NUT3 480 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 ISLR2Q6UXK2 745 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 DLEU7Q6UYE1 221 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 NPSR1Q6W5P4 371 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 MSRB3Q8IXL7 192 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 BEST3Q8N1M1 668 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 DPP10Q8N608 796 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 TRIML2Q8N7C3 387 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 SLC16A11Q8NCK7 471 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 C17orf47Q8NEP4 570 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 RP9Q8TA86 221 aaKnown RBP11.71□□□□□ -0.53
SMN1-202ENST00000380707 FBXO30Q8TB52 745 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 NEURL3Q96EH8 262 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 AURKBQ96GD4 344 aaPredicted RBP11.71□□□□□ -0.53
SMN1-202ENST00000380707 LCORQ96JN0 433 aaPredicted RBP11.71□□□□□ -0.53
SMN1-202ENST00000380707 ZNF354BQ96LW1 612 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 BTBD9Q96Q07 612 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 RASL10BQ96S79 203 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 SMAD5Q99717 465 aaKnown RBP11.71□□□□□ -0.53
SMN1-202ENST00000380707 YIPF4Q9BSR8 244 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 EPS8L2Q9H6S3 715 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 SLC25A37Q9NYZ2 338 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 TEKT2Q9UIF3 430 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 PCDHGA9Q9Y5G4 932 aaKnown RBP11.71□□□□□ -0.53
SMN1-202ENST00000380707 ZFYVE26Q68DK2 2539 aa11.71□□□□□ -0.53
SMN1-202ENST00000380707 ATRXP46100 2492 aa11.71□□□□□ -0.54
SMN1-202ENST00000380707 CNTRLQ7Z7A1 2325 aa11.71□□□□□ -0.54
SMN1-202ENST00000380707 MKRN2OSH3BPM6 223 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 KCNH1O95259 989 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 NADKO95544 446 aaPredicted RBP11.7□□□□□ -0.54
SMN1-202ENST00000380707 F10P00742 488 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 PDGFAP04085 211 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 DRD5P21918 477 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 CHI3L1P36222 383 aaPredicted RBP11.7□□□□□ -0.54
SMN1-202ENST00000380707 MAP3K8P41279 467 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 DCAF7P61962 342 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 RPS26P62854 115 aaKnown RBP11.7□□□□□ -0.54
SMN1-202ENST00000380707 CBX1P83916 185 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 RHDQ02161 417 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 KCNAB2Q13303 367 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 EXOSC6Q5RKV6 272 aaKnown RBP11.7□□□□□ -0.54
SMN1-202ENST00000380707 LRIF1Q5T3J3 769 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 ZNF468Q5VIY5 522 aaPredicted RBP11.7□□□□□ -0.54
SMN1-202ENST00000380707 ABHD17BQ5VST6 288 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 SAXO2Q658L1 398 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 BHLHB9Q6PI77 547 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 LGI4Q8N135 537 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 OR4N2Q8NGD1 307 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 ZFP90Q8TF47 636 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 SLC9A6Q92581 669 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 HOXB13Q92826 284 aaPredicted RBP11.7□□□□□ -0.54
SMN1-202ENST00000380707 TP53INP1Q96A56 240 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 OTUB1Q96FW1 271 aaPredicted RBP11.7□□□□□ -0.54
SMN1-202ENST00000380707 LMF1Q96S06 567 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 ARHGAP9Q9BRR9 750 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 LMF2Q9BU23 707 aaKnown RBP11.7□□□□□ -0.54
SMN1-202ENST00000380707 SERHL2Q9H4I8 314 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 IL1RL2Q9HB29 575 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 ANKRD10Q9NXR5 420 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 PLA2G3Q9NZ20 509 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 VAPAQ9P0L0 249 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 YARS2Q9Y2Z4 477 aaKnown RBP11.7□□□□□ -0.54
SMN1-202ENST00000380707 TRBV5-3A0A0A0MS03 114 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 FRG2CA6NGY1 282 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 BBIP1A8MTZ0 92 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 WDPCPO95876 746 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 ALPPP05187 535 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 ACP2P11117 423 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 MAN2A2P49641 1150 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 SSR4P51571 173 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 STX5Q13190 355 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 MFAP5Q13361 173 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 MMEL1Q495T6 779 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 COQ5Q5HYK3 327 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 REP15Q6BDI9 236 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 ZCCHC12Q6PEW1 402 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 IGFL2Q6UWQ7 119 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 SLC44A2Q8IWA5 706 aaPredicted RBP11.7□□□□□ -0.54
SMN1-202ENST00000380707 EXD3Q8N9H8 876 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 CDRT4Q8N9R6 151 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 PNPT1Q8TCS8 783 aaKnown RBP11.7□□□□□ -0.54
SMN1-202ENST00000380707 CMTM5Q96DZ9 223 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 ACTRT3Q9BYD9 372 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 TPT1P8Q9HAU6 139 aa11.7□□□□□ -0.54
SMN1-202ENST00000380707 CHD6Q8TD26 2715 aa11.69□□□□□ -0.54
SMN1-202ENST00000380707 CPAMD8Q8IZJ3 1885 aa11.69□□□□□ -0.54
SMN1-202ENST00000380707 MRASO14807 208 aa11.69□□□□□ -0.54
SMN1-202ENST00000380707 ACOX3O15254 700 aa11.69□□□□□ -0.54
SMN1-202ENST00000380707 OR6B1O95007 311 aa11.69□□□□□ -0.54
SMN1-202ENST00000380707 NKX2-2O95096 273 aa11.69□□□□□ -0.54
SMN1-202ENST00000380707 UNC5CO95185 931 aa11.69□□□□□ -0.54
SMN1-202ENST00000380707 MATN1P21941 496 aa11.69□□□□□ -0.54
SMN1-202ENST00000380707 ABCD3P28288 659 aa11.69□□□□□ -0.54
SMN1-202ENST00000380707 GABRA3P34903 492 aa11.69□□□□□ -0.54
SMN1-202ENST00000380707 TRHRP34981 398 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms