RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 PSRC1Q6PGN9 363 aaPredicted RBP8.87□□□□□ -0.99
PTPRA-204ENST00000380393 FAM131BQ86XD5 332 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 CFAP206Q8IYR0 622 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 RTL3Q8N8U3 475 aaKnown RBP8.87□□□□□ -0.99
PTPRA-204ENST00000380393 RFKQ969G6 155 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 TAPBPLQ9BX59 468 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 NXF3Q9H4D5 531 aaKnown RBP8.87□□□□□ -0.99
PTPRA-204ENST00000380393 SLC52A3Q9NQ40 469 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 PRDM7Q9NQW5 492 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 CFAP20Q9Y6A4 193 aaKnown RBP8.87□□□□□ -0.99
PTPRA-204ENST00000380393 A0A0A6YYC8 382 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 COLCA2A8K830 154 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 I3L1I5 382 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 I6L893 689 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 PPIHO43447 177 aaKnown RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 OR4F21O95013 312 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 FGF19O95750 216 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 IGHV2-5P01817 119 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 TCRBP04435 133 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 PSAPP07602 524 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 G6PDP11413 515 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 LCP1P13796 627 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 AVPR1BP47901 424 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 DNAJB13P59910 316 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 CAMK2GQ13555 558 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 GAMTQ14353 236 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 ATP6AP1LQ52LC2 224 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 SPIN4Q56A73 249 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 OR4F3Q6IEY1 312 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 VITQ6UXI7 678 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 TMEM91Q6ZNR0 172 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 FGD2Q7Z6J4 655 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 KCNMB4Q86W47 210 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 CEP97Q8IW35 865 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 PNPLA1Q8N8W4 532 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 PPHLN1Q8NEY8 458 aaKnown RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 FOXRED1Q96CU9 486 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 ZNF558Q96NG5 402 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 KCNC2Q96PR1 638 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 PITX2Q99697 317 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 NSUN3Q9H649 340 aaKnown RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 RNF122Q9H9V4 155 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 BCO1Q9HAY6 547 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 MYOZ1Q9NP98 299 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 TEX10Q9NXF1 929 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 NCF1BA6NI72 391 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 C2CD4BA6NLJ0 364 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 NCF1CA8MVU1 366 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 HSBP1L1C9JCN9 74 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 H7C1Q1 480 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 SUSD5O60279 629 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 TMEM127O75204 238 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 ANXA9O76027 345 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 HEXAP06865 529 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 ASGR1P07306 291 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 NPSP0C0P6 89 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 CRYBB2P43320 205 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 UFM1P61960 85 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 CTBP1Q13363 440 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 RSU1Q15404 277 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 NDUFAF6Q330K2 333 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 C3orf38Q5JPI3 329 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 C22orf42Q6IC83 251 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 RNF165Q6ZSG1 346 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 ZDHHC21Q8IVQ6 265 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 TP53INP2Q8IXH6 220 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 RYBPQ8N488 228 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 OR56A3Q8NH54 315 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 C14orf79Q96F83 325 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 TGM7Q96PF1 710 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 PDCD2LQ9BRP1 358 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 SLC25A32Q9H2D1 315 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 PXMP2Q9NR77 195 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 LOXHD1Q8IVV2 1947 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 HYKKA2RU49 373 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 C5orf58C9J3I9 102 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 STK25O00506 426 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 CXCR6O00574 342 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 DIRAS1O95057 198 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 STAG3L1P0CL83 205 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 THEGLP0DJG4 465 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 ADCYAP1P18509 176 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 ARL4AP40617 200 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 POLR2JP52435 117 aaKnown RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 TWF1Q12792 350 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 ZNF177Q13360 481 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 CSHL1Q14406 222 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 UBXN2BQ14CS0 331 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 CRTC2Q53ET0 693 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 METAP1DQ6UB28 335 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 DNAJB7Q7Z6W7 309 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 FOXRED2Q8IWF2 684 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 CDK20Q8IZL9 346 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 SYT14Q8NB59 555 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 OR9A1PQ8NGU1 263 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 OR10A6Q8NH74 314 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 STOML3Q8TAV4 291 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 TMEM174Q8WUU8 243 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 P2RY11Q96G91 374 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms