RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ACAD8Q9UKU7 415 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 SLC9A8Q9Y2E8 581 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 POFUT2Q9Y2G5 429 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 HSPE1-MOB4S4R3N1 261 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 ADAMTS9Q9P2N4 1935 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 CASC3O15234 703 aaKnown RBP18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 SLITRK5O94991 958 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 NSA2O95478 260 aaKnown RBP18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 ALPPP05187 535 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 SLC35E2P0CK97 266 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 POU2F1P14859 743 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 GLB1P16278 677 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 CFHR1Q03591 330 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 PIN1Q13526 163 aaPredicted RBP18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 KCNAB1Q14722 419 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 SYT16Q17RD7 645 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 AMZ1Q400G9 498 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 TCTE1Q5JU00 501 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 GARNL3Q5VVW2 1013 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 VRK2Q86Y07 508 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 OR6T1Q8NGN1 323 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 CTHRC1Q96CG8 243 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 HRASLS5Q96KN8 279 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 DHRS1Q96LJ7 313 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 PITX2Q99697 317 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 ZNF556Q9HAH1 456 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 AASSQ9UDR5 926 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 MKLN1Q9UL63 735 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 A4GNTQ9UNA3 340 aa18.55■□□□□ 0.56
PDLIM5-205ENST00000380180 H3BSA7 217 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 GASTP01350 101 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 H1F0P07305 194 aaKnown RBP18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 ARRB1P49407 418 aaPredicted RBP18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 HPCAP84074 193 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 ERV3-1Q14264 604 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 EXOSC7Q15024 291 aaKnown RBP18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 ARHGAP11BQ3KRB8 267 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 FGD3Q5JSP0 725 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 NIPAL1Q6NVV3 410 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 Q6ZPB1 254 aaPredicted RBP18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 DGAT2L6Q6ZPD8 337 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 CCDC71Q8IV32 467 aaPredicted RBP18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 Q8N9G6 341 aaPredicted RBP18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 MMABQ96EY8 250 aaPredicted RBP18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 PIGUQ9H490 435 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 SLC1A7O00341 560 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 GNSP15586 552 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 CBLP22681 906 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 ELAVL4P26378 380 aaKnown RBP18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 SEPHS1P49903 392 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 SLC13A2Q13183 592 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 TOP3AQ13472 1001 aaPredicted RBP18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 ZNF770Q6IQ21 691 aaPredicted RBP18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 ZNF773Q6PK81 442 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 FRRS1Q6ZNA5 592 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 METTL27Q8N6F8 245 aaPredicted RBP18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 AQP11Q8NBQ7 271 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 SGCDQ92629 289 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 UBE2FQ969M7 185 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 GTPBP3Q969Y2 492 aaKnown RBP18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 TMCC3Q9ULS5 477 aa18.54■□□□□ 0.56
PDLIM5-205ENST00000380180 ARRDC5A6NEK1 342 aa18.53■□□□□ 0.56
PDLIM5-205ENST00000380180 CCDC160A6NGH7 325 aa18.53■□□□□ 0.56
PDLIM5-205ENST00000380180 CDC123O75794 336 aaPredicted RBP18.53■□□□□ 0.56
PDLIM5-205ENST00000380180 SEC23BQ15437 767 aa18.53■□□□□ 0.56
PDLIM5-205ENST00000380180 EXOSC6Q5RKV6 272 aaKnown RBP18.53■□□□□ 0.56
PDLIM5-205ENST00000380180 DCST1Q5T197 706 aa18.53■□□□□ 0.56
PDLIM5-205ENST00000380180 PMS2CLQ68D20 193 aa18.53■□□□□ 0.56
PDLIM5-205ENST00000380180 BORAQ6PGQ7 559 aa18.53■□□□□ 0.56
PDLIM5-205ENST00000380180 KCTD8Q6ZWB6 473 aa18.53■□□□□ 0.56
PDLIM5-205ENST00000380180 WDR5BQ86VZ2 330 aa18.53■□□□□ 0.56
PDLIM5-205ENST00000380180 PLXDC1Q8IUK5 500 aa18.53■□□□□ 0.56
PDLIM5-205ENST00000380180 BPIFB6Q8NFQ5 453 aa18.53■□□□□ 0.56
PDLIM5-205ENST00000380180 SDF2Q99470 211 aa18.53■□□□□ 0.56
PDLIM5-205ENST00000380180 TMEM9Q9P0T7 183 aa18.53■□□□□ 0.56
PDLIM5-205ENST00000380180 CHST2Q9Y4C5 530 aa18.53■□□□□ 0.56
PDLIM5-205ENST00000380180 TMEM184BQ9Y519 407 aaPredicted RBP18.53■□□□□ 0.56
PDLIM5-205ENST00000380180 PCDHGA6Q9Y5G7 932 aa18.53■□□□□ 0.56
PDLIM5-205ENST00000380180 CEPT1Q9Y6K0 416 aa18.53■□□□□ 0.56
PDLIM5-205ENST00000380180 FITM1A5D6W6 292 aa18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 TGFBR3LH3BV60 316 aa18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 DUX1O43812 170 aa18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 PCDHGA12O60330 932 aa18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 OR10H2O60403 315 aa18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 CTNSO60931 367 aa18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 ANGPTL1O95841 491 aa18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 TDGF1P13385 188 aa18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 PAX7P23759 505 aa18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 GPR3P46089 330 aa18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 INAVAQ3KP66 663 aa18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 SNAP47Q5SQN1 464 aa18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 CCNJQ5T5M9 372 aa18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 TYW3Q6IPR3 259 aaKnown RBP18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 CDRT4Q8N9R6 151 aa18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 OR6C4Q8NGE1 309 aa18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 OR52P1PQ8NH57 321 aa18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 MTHFD2LQ9H903 347 aaPredicted RBP18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 BLOC1S6Q9UL45 172 aa18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 MRPS33Q9Y291 106 aaKnown RBP18.52■□□□□ 0.56
PDLIM5-205ENST00000380180 WDR45Q9Y484 360 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms