RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 MBNL1Q9NR56 388 aaKnown RBP17.1■□□□□ 0.33
TDP2-202ENST00000378198 CTPS2Q9NRF8 586 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 IMP3Q9NV31 184 aaKnown RBP17.1■□□□□ 0.33
TDP2-202ENST00000378198 ZNF221Q9UK13 617 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 CARD8Q9Y2G2 431 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 RBMX2Q9Y388 322 aaKnown RBP17.1■□□□□ 0.33
TDP2-202ENST00000378198 EMC8O43402 210 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 MSL3P1P0C860 447 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 CSNK2A2P19784 350 aaPredicted RBP17.09■□□□□ 0.33
TDP2-202ENST00000378198 ATP5A1P25705 553 aaKnown RBP17.09■□□□□ 0.33
TDP2-202ENST00000378198 AHRP35869 848 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 TRIM23P36406 574 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 NR4A2P43354 598 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 TSPAN31Q12999 210 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 HNRNPA0Q13151 305 aaKnown RBP17.09■□□□□ 0.33
TDP2-202ENST00000378198 ZNF311Q5JNZ3 666 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 ZNF517Q6ZMY9 492 aaPredicted RBP17.09■□□□□ 0.33
TDP2-202ENST00000378198 PRR23CQ6ZRP0 262 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 PRICKLE2Q7Z3G6 844 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 SLC9A6Q92581 669 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 ASB16Q96NS5 453 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 OR7D2Q96RA2 312 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 TIMM29Q9BSF4 260 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 ABCB9Q9NP78 766 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 ZDHHC4Q9NPG8 344 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 CALML5Q9NZT1 146 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 PLEKHB1Q9UF11 243 aaPredicted RBP17.09■□□□□ 0.33
TDP2-202ENST00000378198 SLC13A4Q9UKG4 626 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 SF3B6Q9Y3B4 125 aaKnown RBP17.09■□□□□ 0.33
TDP2-202ENST00000378198 ATG4BQ9Y4P1 393 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 OR1A2Q9Y585 309 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 FAM170BA6NMN3 283 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 SLC30A4O14863 429 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 UBXN7O94888 489 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 ALPPP05187 535 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 ALPPL2P10696 532 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 IFNA8P32881 189 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 RFX2P48378 723 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 TGM4P49221 684 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 ABATP80404 500 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 PDGFRLQ15198 375 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 AGBL4Q5VU57 503 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 SLC48A1Q6P1K1 146 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 FAM131AQ6UXB0 335 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 RASSF6Q6ZTQ3 369 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 SRFBP1Q8NEF9 429 aaKnown RBP17.09■□□□□ 0.33
TDP2-202ENST00000378198 ANKK1Q8NFD2 765 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 OR2L5Q8NG80 312 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 OR6F1Q8NGZ6 308 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 UFD1Q92890 307 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 SMARCD2Q92925 531 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 TMEM203Q969S6 136 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 C16orf58Q96GQ5 468 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 NEDD4LQ96PU5 975 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 ANKRD19PQ9H560 264 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 PHPT1Q9NRX4 125 aaPredicted RBP17.09■□□□□ 0.33
TDP2-202ENST00000378198 RWDD3Q9Y3V2 267 aa17.09■□□□□ 0.33
TDP2-202ENST00000378198 MDC1Q14676 2089 aaKnown RBP17.08■□□□□ 0.33
TDP2-202ENST00000378198 C4orf51C9J302 202 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 AIFM1O95831 613 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 MPIP34949 423 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 MTNR1AP48039 350 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 NKX2-5P52952 324 aaPredicted RBP17.08■□□□□ 0.33
TDP2-202ENST00000378198 DUSP2Q05923 314 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 ST3GAL3Q11203 375 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 KRT33BQ14525 404 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 IRF4Q15306 451 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 NDUFA5Q16718 116 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 OR2G6Q5TZ20 316 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 TMEM107Q6UX40 140 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 RRM2BQ7LG56 351 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 GDPD1Q8N9F7 314 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 C1GALT1C1Q96EU7 318 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 MIXL1Q9H2W2 232 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 SLC6A20Q9NP91 592 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 TIGARQ9NQ88 270 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 GIMAP4Q9NUV9 329 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 CES1P1Q9UKY3 287 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 LIPT1Q9Y234 373 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 GSTK1Q9Y2Q3 226 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 KCNE3Q9Y6H6 103 aa17.08■□□□□ 0.33
TDP2-202ENST00000378198 C2orf16Q68DN1 1984 aa17.08■□□□□ 0.32
TDP2-202ENST00000378198 A0A1W2PQL4 384 aaPredicted RBP17.08■□□□□ 0.32
TDP2-202ENST00000378198 FABP12A6NFH5 140 aa17.08■□□□□ 0.32
TDP2-202ENST00000378198 KDM4EB2RXH2 506 aaPredicted RBP17.08■□□□□ 0.32
TDP2-202ENST00000378198 MID1O15344 667 aa17.08■□□□□ 0.32
TDP2-202ENST00000378198 STATHP02808 62 aa17.08■□□□□ 0.32
TDP2-202ENST00000378198 CLEC2LP0C7M8 214 aa17.08■□□□□ 0.32
TDP2-202ENST00000378198 AZGP1P25311 298 aaKnown RBP17.08■□□□□ 0.32
TDP2-202ENST00000378198 PTGER1P34995 402 aa17.08■□□□□ 0.32
TDP2-202ENST00000378198 TSFMP43897 325 aaKnown RBP17.08■□□□□ 0.32
TDP2-202ENST00000378198 RPS25P62851 125 aaKnown RBP17.08■□□□□ 0.32
TDP2-202ENST00000378198 ASAH1Q13510 395 aa17.08■□□□□ 0.32
TDP2-202ENST00000378198 SF3B4Q15427 424 aaKnown RBP eCLIP17.08■□□□□ 0.322e-9■■■■□ 26.5
TDP2-202ENST00000378198 ZNF750Q32MQ0 723 aa17.08■□□□□ 0.32
TDP2-202ENST00000378198 ZNF730Q6ZMV8 503 aa17.08■□□□□ 0.32
TDP2-202ENST00000378198 QSOX2Q6ZRP7 698 aa17.08■□□□□ 0.32
TDP2-202ENST00000378198 NUP43Q8NFH3 380 aa17.08■□□□□ 0.32
TDP2-202ENST00000378198 CAPSLQ8WWF8 208 aa17.08■□□□□ 0.32
TDP2-202ENST00000378198 GATAD2BQ8WXI9 593 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms