RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 CACUL1Q86Y37 369 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 CCDC116Q8IYX3 515 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 OR2A1Q8NGT9 310 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 OR8K5Q8NH50 307 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 FGF20Q9NP95 211 aaPredicted RBP23.79■■□□□ 1.4
C9orf40-201ENST00000376854 OR1A2Q9Y585 309 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 N6AMT1Q9Y5N5 214 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 KCNE3Q9Y6H6 103 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 RANBP2P49792 3224 aaKnown RBP23.79■■□□□ 1.4
C9orf40-201ENST00000376854 TMEM129A0AVI4 362 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 SNTNA6NMZ2 147 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 ACP5P13686 325 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 IL12RB1P42701 662 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 TAS2R41P59536 307 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 SFXN5Q8TD22 340 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 C16orf58Q96GQ5 468 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 DIRAS2Q96HU8 199 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 MARCH7Q9H992 704 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 PRSS16Q9NQE7 514 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 ACSL5Q9ULC5 683 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 REV3LO60673 3130 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 A0A1W2PR48 441 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 IRGMA1A4Y4 181 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 FABP12A6NFH5 140 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 C4orf51C9J302 202 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 ERI3O43414 337 aaKnown RBP23.78■■□□□ 1.4
C9orf40-201ENST00000376854 TCEA1P23193 301 aaKnown RBP23.78■■□□□ 1.4
C9orf40-201ENST00000376854 DAB2P98082 770 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 NDUFA5Q16718 116 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 XKRXQ6PP77 449 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 TMEM107Q6UX40 140 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 ADGRD2Q7Z7M1 963 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 GATAD2AQ86YP4 633 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 GNPDA2Q8TDQ7 276 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 CNRIP1Q96F85 164 aaPredicted RBP23.78■■□□□ 1.4
C9orf40-201ENST00000376854 MCOLN1Q9GZU1 580 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 IMP3Q9NV31 184 aaKnown RBP23.78■■□□□ 1.4
C9orf40-201ENST00000376854 TOR4AQ9NXH8 423 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 ATG4BQ9Y4P1 393 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 LRRTM2O43300 516 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 IDH3BO43837 385 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 PCDH8O95206 1070 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 C8orf89P0DMQ9 161 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 MTNR1AP48039 350 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 RAB28P51157 221 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 DUSP2Q05923 314 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 CRTC2Q53ET0 693 aaPredicted RBP23.78■■□□□ 1.4
C9orf40-201ENST00000376854 OR8D4Q8NGM9 314 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 CAMK1GQ96NX5 476 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 MBNL1Q9NR56 388 aaKnown RBP23.78■■□□□ 1.4
C9orf40-201ENST00000376854 DDX28Q9NUL7 540 aaKnown RBP23.78■■□□□ 1.4
C9orf40-201ENST00000376854 ASB4Q9Y574 426 aa23.78■■□□□ 1.4
C9orf40-201ENST00000376854 MUC22E2RYF6 1773 aaPredicted RBP23.78■■□□□ 1.4
C9orf40-201ENST00000376854 SMIM30A4D0T7 59 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 TBC1D3BA6NDS4 549 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 FAM170BA6NMN3 283 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 SLC30A4O14863 429 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 LATO43561 262 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 HIST1H1TP22492 207 aaPredicted RBP23.77■■□□□ 1.4
C9orf40-201ENST00000376854 MAP4K2Q12851 820 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 TPBGQ13641 420 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 CKAP5Q14008 2032 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 ZIC1Q15915 447 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 ZNF311Q5JNZ3 666 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 DDI2Q5TDH0 399 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 HSDL2Q6YN16 418 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 PRICKLE2Q7Z3G6 844 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 OR56A1Q8NGH5 318 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 UFD1Q92890 307 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 TM9SF2Q99805 663 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 MED18Q9BUE0 208 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 OR2B2Q9GZK3 357 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 SF3B6Q9Y3B4 125 aaKnown RBP23.77■■□□□ 1.4
C9orf40-201ENST00000376854 TRANK1O15050 2925 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 TFECO14948 347 aaPredicted RBP23.77■■□□□ 1.4
C9orf40-201ENST00000376854 TMCC2O75069 709 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 UBXN7O94888 489 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 FHP07954 510 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 HOXB3P14651 431 aaPredicted RBP23.77■■□□□ 1.4
C9orf40-201ENST00000376854 IFNGR2P38484 337 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 HYAL2Q12891 473 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 ASAH1Q13510 395 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 DUSP6Q16828 381 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 MINDY4Q4G0A6 757 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 PDZK1Q5T2W1 519 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 SHFQ7M4L6 423 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 ACOT4Q8N9L9 421 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 ANKK1Q8NFD2 765 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 MS4A6EQ96DS6 147 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 SLC38A2Q96QD8 506 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 PHOX2BQ99453 314 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 SLC22A4Q9H015 551 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 MMP28Q9H239 520 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 CNIH4Q9P003 139 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 ENTPD4Q9Y227 616 aa23.77■■□□□ 1.4
C9orf40-201ENST00000376854 MEIOCA2RUB1 952 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 RGS13O14921 159 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 FRS3O43559 492 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 S100A1P23297 94 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 MLLT1Q03111 559 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms