RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 FRAT2O75474 233 aaPredicted RBP1.65□□□□□ -2.15
VPS13A-206ENST00000376646 IFNB1P01574 187 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 IGHG1P01857 330 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 GSTA1P08263 222 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 FOSL2P15408 326 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 TSPAN8P19075 237 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 PTMSP20962 102 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 CALML3P27482 149 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 HPDP32754 393 aaPredicted RBP1.65□□□□□ -2.15
VPS13A-206ENST00000376646 SLC1A4P43007 532 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 MAGEA4P43358 317 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 SGSHP51688 502 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 HAGHQ16775 308 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 POM121L1PQ3SYA9 428 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 TTC31Q49AM3 519 aaPredicted RBP1.65□□□□□ -2.15
VPS13A-206ENST00000376646 AGAP7PQ5VUJ5 663 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 LEMD1Q68G75 181 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 GPBP1Q86WP2 473 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 ZBED8Q8IZ13 594 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 FGFRL1Q8N441 504 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 C11orf42Q8N5U0 333 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 OR52B4Q8NGK2 314 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 CCDC110Q8TBZ0 833 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 SELENOMQ8WWX9 145 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 MCHR2Q969V1 340 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 NCLNQ969V3 563 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 CNOT6LQ96LI5 555 aaKnown RBP1.65□□□□□ -2.15
VPS13A-206ENST00000376646 ATF6BQ99941 703 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 APOOQ9BUR5 198 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 OCR1Q9BZK8 76 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 CCSER1Q9C0I3 900 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 RNF41Q9H4P4 317 aaPredicted RBP1.65□□□□□ -2.15
VPS13A-206ENST00000376646 ALG9Q9H6U8 611 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 B4GALT7Q9UBV7 327 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 AURKCQ9UQB9 309 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 SLC9A8Q9Y2E8 581 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 CPQQ9Y646 472 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 FKBP7Q9Y680 259 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 SYNJ2O15056 1496 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 A0A0J9YVX5 310 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 RNF212BA8MTL3 300 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 K7EPI3 171 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 CYB561D2O14569 222 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 EI24O14681 340 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 SMPD2O60906 423 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 SCGB2A1O75556 95 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 STK17BO94768 372 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 DIRAS3O95661 229 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 ECDO95905 644 aaPredicted RBP1.64□□□□□ -2.15
VPS13A-206ENST00000376646 IGHG3P01860 377 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 LMO2P25791 158 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 UCP1P25874 307 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 CCND2P30279 289 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 SPRP35270 261 aaPredicted RBP1.64□□□□□ -2.15
VPS13A-206ENST00000376646 NOP14P78316 857 aaKnown RBP1.64□□□□□ -2.15
VPS13A-206ENST00000376646 GSTO1P78417 241 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 NAAAQ02083 359 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 PRKCEQ02156 737 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 ACY1Q03154 408 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 SRYQ05066 204 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 DPYSQ14117 519 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 ZSWIM7Q19AV6 140 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 TMEM44Q2T9K0 475 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 LRIT3Q3SXY7 679 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 ERASQ7Z444 233 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 GOLGA7Q7Z5G4 137 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 CENPSQ8N2Z9 138 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 ZBTB44Q8NCP5 570 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 OR4F17Q8NGA8 305 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 OR52J3Q8NH60 311 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 WDR36Q8NI36 951 aaKnown RBP1.64□□□□□ -2.15
VPS13A-206ENST00000376646 C16orf45Q96MC5 204 aaPredicted RBP1.64□□□□□ -2.15
VPS13A-206ENST00000376646 ZIM3Q96PE6 472 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 OR4F4Q96R69 305 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 ELL3Q9HB65 397 aaPredicted RBP1.64□□□□□ -2.15
VPS13A-206ENST00000376646 VAT1LQ9HCJ6 419 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 TNFRSF19Q9NS68 423 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 GDAP2Q9NXN4 497 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 ANKMY1Q9P2S6 941 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 P2RX2Q9UBL9 471 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 SEC14L4Q9UDX3 406 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 EMCNQ9ULC0 261 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 NCAPD2Q15021 1401 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 TDRD6O60522 2096 aaKnown RBP1.64□□□□□ -2.15
VPS13A-206ENST00000376646 FAM230AA0A1W2PPH8 454 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 ANKRD30BLA7E2S9 258 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 BUB1O43683 1085 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 VENTXO95231 258 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 APBB3O95704 486 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 SEMA4FO95754 770 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 CA3P07451 260 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 FCGR3AP08637 254 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 RRASP10301 218 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 HSD17B1P14061 328 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 NCF1P14598 390 aaPredicted RBP1.64□□□□□ -2.15
VPS13A-206ENST00000376646 DESP17661 470 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 PAICSP22234 425 aaKnown RBP1.64□□□□□ -2.15
VPS13A-206ENST00000376646 RFC2P35250 354 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 SAA4P35542 130 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 GSK3BP49841 420 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms